Protein–RNA interactions for Protein: Q8R4U6

Top1mt, DNA topoisomerase I, mitochondrial, mousemouse

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Top1mtQ8R4U6 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Top1mtQ8R4U6 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Top1mtQ8R4U6 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Top1mtQ8R4U6 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Top1mtQ8R4U6 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC17.13■□□□□ 0.33
Top1mtQ8R4U6 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Top1mtQ8R4U6 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Top1mtQ8R4U6 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Top1mtQ8R4U6 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Top1mtQ8R4U6 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Top1mtQ8R4U6 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Top1mtQ8R4U6 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
Top1mtQ8R4U6 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Top1mtQ8R4U6 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Top1mtQ8R4U6 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Top1mtQ8R4U6 Gm6539-201ENSMUST00000119157 1064 ntBASIC17.12■□□□□ 0.33
Top1mtQ8R4U6 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC17.12■□□□□ 0.33
Top1mtQ8R4U6 Gm18049-201ENSMUST00000208909 581 ntBASIC17.12■□□□□ 0.33
Top1mtQ8R4U6 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Top1mtQ8R4U6 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Top1mtQ8R4U6 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC17.12■□□□□ 0.33
Top1mtQ8R4U6 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC17.12■□□□□ 0.33
Top1mtQ8R4U6 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Top1mtQ8R4U6 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Top1mtQ8R4U6 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Top1mtQ8R4U6 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Top1mtQ8R4U6 Mmp14-206ENSMUST00000225641 3238 ntBASIC17.11■□□□□ 0.33
Top1mtQ8R4U6 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Top1mtQ8R4U6 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Top1mtQ8R4U6 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Top1mtQ8R4U6 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Top1mtQ8R4U6 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Top1mtQ8R4U6 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Top1mtQ8R4U6 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Top1mtQ8R4U6 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Top1mtQ8R4U6 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Top1mtQ8R4U6 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
Top1mtQ8R4U6 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Top1mtQ8R4U6 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Top1mtQ8R4U6 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Top1mtQ8R4U6 Gm12882-201ENSMUST00000121696 517 ntBASIC17.11■□□□□ 0.33
Top1mtQ8R4U6 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC17.11■□□□□ 0.33
Top1mtQ8R4U6 Gm27702-201ENSMUST00000184512 56 ntBASIC17.11■□□□□ 0.33
Top1mtQ8R4U6 AC151286.1-201ENSMUST00000198489 145 ntBASIC17.11■□□□□ 0.33
Top1mtQ8R4U6 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Top1mtQ8R4U6 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Top1mtQ8R4U6 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Top1mtQ8R4U6 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Top1mtQ8R4U6 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Top1mtQ8R4U6 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
Top1mtQ8R4U6 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Top1mtQ8R4U6 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Top1mtQ8R4U6 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Top1mtQ8R4U6 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC17.11■□□□□ 0.33
Top1mtQ8R4U6 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC17.1■□□□□ 0.33
Top1mtQ8R4U6 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Top1mtQ8R4U6 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Top1mtQ8R4U6 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Top1mtQ8R4U6 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Top1mtQ8R4U6 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Top1mtQ8R4U6 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC17.1■□□□□ 0.33
Top1mtQ8R4U6 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC17.1■□□□□ 0.33
Top1mtQ8R4U6 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Top1mtQ8R4U6 Gm9824-201ENSMUST00000178707 561 ntBASIC17.1■□□□□ 0.33
Top1mtQ8R4U6 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC17.1■□□□□ 0.33
Top1mtQ8R4U6 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Top1mtQ8R4U6 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC17.1■□□□□ 0.33
Top1mtQ8R4U6 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Top1mtQ8R4U6 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Top1mtQ8R4U6 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Top1mtQ8R4U6 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Top1mtQ8R4U6 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Top1mtQ8R4U6 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Top1mtQ8R4U6 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
Top1mtQ8R4U6 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Top1mtQ8R4U6 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Top1mtQ8R4U6 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC17.1■□□□□ 0.33
Top1mtQ8R4U6 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Top1mtQ8R4U6 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Top1mtQ8R4U6 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Top1mtQ8R4U6 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
Top1mtQ8R4U6 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Top1mtQ8R4U6 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Top1mtQ8R4U6 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Top1mtQ8R4U6 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
Top1mtQ8R4U6 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC17.09■□□□□ 0.33
Top1mtQ8R4U6 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Top1mtQ8R4U6 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Top1mtQ8R4U6 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Top1mtQ8R4U6 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC17.09■□□□□ 0.33
Top1mtQ8R4U6 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC17.09■□□□□ 0.33
Top1mtQ8R4U6 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Top1mtQ8R4U6 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC17.09■□□□□ 0.33
Top1mtQ8R4U6 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Top1mtQ8R4U6 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC17.09■□□□□ 0.33
Top1mtQ8R4U6 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Top1mtQ8R4U6 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Top1mtQ8R4U6 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC17.09■□□□□ 0.33
Top1mtQ8R4U6 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC17.09■□□□□ 0.33
Top1mtQ8R4U6 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 65.8 ms