Protein–RNA interactions for Protein: Q8CEZ1

Smco1, Single-pass membrane and coiled-coil domain-containing protein 1, mousemouse

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco1Q8CEZ1 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smco1Q8CEZ1 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Smco1Q8CEZ1 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Smco1Q8CEZ1 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC13.04□□□□□ -0.32
Smco1Q8CEZ1 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smco1Q8CEZ1 Gm5184-201ENSMUST00000220417 1702 ntBASIC13.04□□□□□ -0.32
Smco1Q8CEZ1 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smco1Q8CEZ1 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC13.04□□□□□ -0.32
Smco1Q8CEZ1 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Smco1Q8CEZ1 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Smco1Q8CEZ1 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smco1Q8CEZ1 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smco1Q8CEZ1 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smco1Q8CEZ1 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Smco1Q8CEZ1 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smco1Q8CEZ1 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Smco1Q8CEZ1 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smco1Q8CEZ1 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Smco1Q8CEZ1 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Smco1Q8CEZ1 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC13.03□□□□□ -0.32
Smco1Q8CEZ1 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smco1Q8CEZ1 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smco1Q8CEZ1 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smco1Q8CEZ1 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Smco1Q8CEZ1 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Smco1Q8CEZ1 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Smco1Q8CEZ1 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC13.03□□□□□ -0.32
Smco1Q8CEZ1 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Smco1Q8CEZ1 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smco1Q8CEZ1 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smco1Q8CEZ1 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smco1Q8CEZ1 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smco1Q8CEZ1 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Smco1Q8CEZ1 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Smco1Q8CEZ1 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Smco1Q8CEZ1 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Smco1Q8CEZ1 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Smco1Q8CEZ1 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC13.03□□□□□ -0.32
Smco1Q8CEZ1 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smco1Q8CEZ1 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smco1Q8CEZ1 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smco1Q8CEZ1 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC13.03□□□□□ -0.32
Smco1Q8CEZ1 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smco1Q8CEZ1 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smco1Q8CEZ1 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Smco1Q8CEZ1 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smco1Q8CEZ1 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Smco1Q8CEZ1 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smco1Q8CEZ1 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smco1Q8CEZ1 Kcnk16-202ENSMUST00000225596 2127 ntBASIC13.03□□□□□ -0.32
Smco1Q8CEZ1 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smco1Q8CEZ1 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Smco1Q8CEZ1 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smco1Q8CEZ1 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smco1Q8CEZ1 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smco1Q8CEZ1 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smco1Q8CEZ1 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Smco1Q8CEZ1 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Smco1Q8CEZ1 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Smco1Q8CEZ1 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Smco1Q8CEZ1 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Smco1Q8CEZ1 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Smco1Q8CEZ1 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Smco1Q8CEZ1 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Smco1Q8CEZ1 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smco1Q8CEZ1 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Smco1Q8CEZ1 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smco1Q8CEZ1 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC13.02□□□□□ -0.33
Smco1Q8CEZ1 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC13.02□□□□□ -0.33
Smco1Q8CEZ1 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC13.02□□□□□ -0.33
Smco1Q8CEZ1 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC13.02□□□□□ -0.33
Smco1Q8CEZ1 AC154595.3-201ENSMUST00000224579 384 ntBASIC13.02□□□□□ -0.33
Smco1Q8CEZ1 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smco1Q8CEZ1 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smco1Q8CEZ1 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smco1Q8CEZ1 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smco1Q8CEZ1 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
Smco1Q8CEZ1 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Smco1Q8CEZ1 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Smco1Q8CEZ1 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smco1Q8CEZ1 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Smco1Q8CEZ1 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Smco1Q8CEZ1 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smco1Q8CEZ1 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smco1Q8CEZ1 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smco1Q8CEZ1 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Smco1Q8CEZ1 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Smco1Q8CEZ1 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smco1Q8CEZ1 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smco1Q8CEZ1 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smco1Q8CEZ1 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smco1Q8CEZ1 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smco1Q8CEZ1 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smco1Q8CEZ1 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smco1Q8CEZ1 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smco1Q8CEZ1 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Smco1Q8CEZ1 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smco1Q8CEZ1 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smco1Q8CEZ1 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smco1Q8CEZ1 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 68.5 ms