Protein–RNA interactions for Protein: Q8C878

Uba3, NEDD8-activating enzyme E1 catalytic subunit, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uba3Q8C878 Gm5566-201ENSMUST00000116118 459 ntBASIC15.08■□□□□ 0
Uba3Q8C878 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC15.08■□□□□ 0
Uba3Q8C878 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC15.08■□□□□ 0
Uba3Q8C878 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC15.08■□□□□ 0
Uba3Q8C878 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Uba3Q8C878 Gm9719-201ENSMUST00000162765 543 ntBASIC15.08■□□□□ 0
Uba3Q8C878 Gm27631-201ENSMUST00000184163 466 ntBASIC15.08■□□□□ 0
Uba3Q8C878 Gm27430-201ENSMUST00000184585 107 ntBASIC15.08■□□□□ 0
Uba3Q8C878 Gm44333-201ENSMUST00000197168 107 ntBASIC15.08■□□□□ 0
Uba3Q8C878 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC15.08■□□□□ 0
Uba3Q8C878 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC15.08■□□□□ 0
Uba3Q8C878 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Uba3Q8C878 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Uba3Q8C878 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Uba3Q8C878 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Uba3Q8C878 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Uba3Q8C878 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Uba3Q8C878 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Uba3Q8C878 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Uba3Q8C878 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Uba3Q8C878 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0
Uba3Q8C878 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Uba3Q8C878 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Uba3Q8C878 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Uba3Q8C878 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0
Uba3Q8C878 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC15.08■□□□□ 0
Uba3Q8C878 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
Uba3Q8C878 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Uba3Q8C878 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Uba3Q8C878 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC15.07■□□□□ 0
Uba3Q8C878 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Uba3Q8C878 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Uba3Q8C878 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC15.07■□□□□ 0
Uba3Q8C878 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC15.07■□□□□ 0
Uba3Q8C878 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC15.07■□□□□ 0
Uba3Q8C878 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Uba3Q8C878 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Uba3Q8C878 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Uba3Q8C878 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC15.07■□□□□ 0
Uba3Q8C878 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
Uba3Q8C878 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC15.07■□□□□ 0
Uba3Q8C878 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC15.07■□□□□ 0
Uba3Q8C878 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC15.07■□□□□ 0
Uba3Q8C878 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Uba3Q8C878 Gm28630-201ENSMUST00000187806 498 ntBASIC15.07■□□□□ 0
Uba3Q8C878 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC15.07■□□□□ 0
Uba3Q8C878 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Uba3Q8C878 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Uba3Q8C878 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Uba3Q8C878 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
Uba3Q8C878 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC15.07■□□□□ 0
Uba3Q8C878 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Uba3Q8C878 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Uba3Q8C878 Nupl1-207ENSMUST00000225311 2475 ntBASIC15.06■□□□□ 0
Uba3Q8C878 Mmp14-206ENSMUST00000225641 3238 ntBASIC15.06■□□□□ 0
Uba3Q8C878 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Uba3Q8C878 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Uba3Q8C878 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Uba3Q8C878 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Uba3Q8C878 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Uba3Q8C878 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC15.06■□□□□ 0
Uba3Q8C878 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC15.06■□□□□ 0
Uba3Q8C878 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC15.06■□□□□ 0
Uba3Q8C878 Mir6956-201ENSMUST00000183598 62 ntBASIC15.06■□□□□ 0
Uba3Q8C878 Gm27618-201ENSMUST00000183671 60 ntBASIC15.06■□□□□ 0
Uba3Q8C878 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC15.06■□□□□ 0
Uba3Q8C878 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Uba3Q8C878 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Uba3Q8C878 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC15.06■□□□□ 0
Uba3Q8C878 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Uba3Q8C878 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Uba3Q8C878 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Uba3Q8C878 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC15.06■□□□□ 0
Uba3Q8C878 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Uba3Q8C878 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Uba3Q8C878 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC15.06■□□□□ 0
Uba3Q8C878 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC15.06■□□□□ 0
Uba3Q8C878 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC15.06■□□□□ 0
Uba3Q8C878 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Uba3Q8C878 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Uba3Q8C878 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Uba3Q8C878 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Uba3Q8C878 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Uba3Q8C878 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Uba3Q8C878 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC15.05■□□□□ -0
Uba3Q8C878 Gm27622-201ENSMUST00000183779 60 ntBASIC15.05■□□□□ -0
Uba3Q8C878 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC15.05■□□□□ -0
Uba3Q8C878 AC090659.2-201ENSMUST00000225378 1186 ntBASIC15.05■□□□□ -0
Uba3Q8C878 Rbfox2-208ENSMUST00000227930 1218 ntBASIC15.05■□□□□ -0
Uba3Q8C878 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Uba3Q8C878 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Uba3Q8C878 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC15.05■□□□□ -0
Uba3Q8C878 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Uba3Q8C878 Gm5763-201ENSMUST00000155951 1530 ntBASIC15.05■□□□□ -0
Uba3Q8C878 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Uba3Q8C878 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ -0
Uba3Q8C878 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Uba3Q8C878 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Uba3Q8C878 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Uba3Q8C878 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms