Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Usp44Q8C2S0 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Usp44Q8C2S0 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Usp44Q8C2S0 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Usp44Q8C2S0 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Usp44Q8C2S0 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Usp44Q8C2S0 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Usp44Q8C2S0 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Usp44Q8C2S0 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Usp44Q8C2S0 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Usp44Q8C2S0 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Usp44Q8C2S0 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
Usp44Q8C2S0 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Usp44Q8C2S0 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Usp44Q8C2S0 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
Usp44Q8C2S0 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Usp44Q8C2S0 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Usp44Q8C2S0 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC16.73■□□□□ 0.27
Usp44Q8C2S0 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Usp44Q8C2S0 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Usp44Q8C2S0 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Usp44Q8C2S0 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Usp44Q8C2S0 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Usp44Q8C2S0 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Usp44Q8C2S0 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Usp44Q8C2S0 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Usp44Q8C2S0 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC16.73■□□□□ 0.27
Usp44Q8C2S0 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Usp44Q8C2S0 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Usp44Q8C2S0 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC16.73■□□□□ 0.27
Usp44Q8C2S0 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC16.73■□□□□ 0.27
Usp44Q8C2S0 Gm6916-202ENSMUST00000205523 195 ntBASIC16.73■□□□□ 0.27
Usp44Q8C2S0 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Usp44Q8C2S0 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Usp44Q8C2S0 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Usp44Q8C2S0 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Usp44Q8C2S0 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Usp44Q8C2S0 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Usp44Q8C2S0 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Usp44Q8C2S0 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Usp44Q8C2S0 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Usp44Q8C2S0 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Usp44Q8C2S0 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Usp44Q8C2S0 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Usp44Q8C2S0 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Usp44Q8C2S0 Mmp14-206ENSMUST00000225641 3238 ntBASIC16.72■□□□□ 0.27
Usp44Q8C2S0 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Usp44Q8C2S0 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Usp44Q8C2S0 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Usp44Q8C2S0 Gm28182-201ENSMUST00000188354 2477 ntBASIC16.72■□□□□ 0.27
Usp44Q8C2S0 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Usp44Q8C2S0 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
Usp44Q8C2S0 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Usp44Q8C2S0 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC16.72■□□□□ 0.27
Usp44Q8C2S0 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC16.72■□□□□ 0.27
Usp44Q8C2S0 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Usp44Q8C2S0 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Usp44Q8C2S0 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Usp44Q8C2S0 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Usp44Q8C2S0 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Usp44Q8C2S0 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Usp44Q8C2S0 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC16.72■□□□□ 0.27
Usp44Q8C2S0 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Usp44Q8C2S0 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
Usp44Q8C2S0 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Usp44Q8C2S0 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC16.72■□□□□ 0.27
Usp44Q8C2S0 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Usp44Q8C2S0 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Usp44Q8C2S0 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Usp44Q8C2S0 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Usp44Q8C2S0 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC16.71■□□□□ 0.27
Usp44Q8C2S0 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
Usp44Q8C2S0 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Usp44Q8C2S0 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Usp44Q8C2S0 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC16.71■□□□□ 0.27
Usp44Q8C2S0 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Usp44Q8C2S0 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Usp44Q8C2S0 Gm15653-201ENSMUST00000119247 907 ntBASIC16.71■□□□□ 0.27
Usp44Q8C2S0 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC16.71■□□□□ 0.27
Usp44Q8C2S0 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC16.71■□□□□ 0.27
Usp44Q8C2S0 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Usp44Q8C2S0 AC121804.3-201ENSMUST00000223420 295 ntBASIC16.71■□□□□ 0.27
Usp44Q8C2S0 AC156016.3-201ENSMUST00000228623 344 ntBASIC16.71■□□□□ 0.27
Usp44Q8C2S0 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Usp44Q8C2S0 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Usp44Q8C2S0 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC16.71■□□□□ 0.27
Usp44Q8C2S0 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Usp44Q8C2S0 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC16.7■□□□□ 0.26
Usp44Q8C2S0 Gm9347-201ENSMUST00000211473 1607 ntBASIC16.7■□□□□ 0.26
Usp44Q8C2S0 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Usp44Q8C2S0 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Usp44Q8C2S0 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Usp44Q8C2S0 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Usp44Q8C2S0 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Usp44Q8C2S0 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Usp44Q8C2S0 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Usp44Q8C2S0 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Usp44Q8C2S0 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Usp44Q8C2S0 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Usp44Q8C2S0 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms