Protein–RNA interactions for Protein: Q8C1Q6

Smim4, Small integral membrane protein 4, mousemouse

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim4Q8C1Q6 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smim4Q8C1Q6 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Smim4Q8C1Q6 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smim4Q8C1Q6 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smim4Q8C1Q6 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Smim4Q8C1Q6 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smim4Q8C1Q6 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Smim4Q8C1Q6 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC12□□□□□ -0.49
Smim4Q8C1Q6 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smim4Q8C1Q6 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Smim4Q8C1Q6 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smim4Q8C1Q6 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC12□□□□□ -0.49
Smim4Q8C1Q6 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Smim4Q8C1Q6 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC12□□□□□ -0.49
Smim4Q8C1Q6 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Smim4Q8C1Q6 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Smim4Q8C1Q6 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC12□□□□□ -0.49
Smim4Q8C1Q6 Gm5177-201ENSMUST00000183092 997 ntBASIC12□□□□□ -0.49
Smim4Q8C1Q6 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC12□□□□□ -0.49
Smim4Q8C1Q6 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Smim4Q8C1Q6 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smim4Q8C1Q6 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smim4Q8C1Q6 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC12□□□□□ -0.49
Smim4Q8C1Q6 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC12□□□□□ -0.49
Smim4Q8C1Q6 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smim4Q8C1Q6 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smim4Q8C1Q6 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smim4Q8C1Q6 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smim4Q8C1Q6 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC12□□□□□ -0.49
Smim4Q8C1Q6 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC12□□□□□ -0.49
Smim4Q8C1Q6 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Smim4Q8C1Q6 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Smim4Q8C1Q6 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smim4Q8C1Q6 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Smim4Q8C1Q6 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC11.99□□□□□ -0.49
Smim4Q8C1Q6 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Smim4Q8C1Q6 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smim4Q8C1Q6 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC11.99□□□□□ -0.49
Smim4Q8C1Q6 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Smim4Q8C1Q6 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smim4Q8C1Q6 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Smim4Q8C1Q6 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Smim4Q8C1Q6 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Smim4Q8C1Q6 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smim4Q8C1Q6 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smim4Q8C1Q6 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Smim4Q8C1Q6 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smim4Q8C1Q6 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Smim4Q8C1Q6 Gm18733-201ENSMUST00000173950 856 ntBASIC11.99□□□□□ -0.49
Smim4Q8C1Q6 Gm27301-201ENSMUST00000184012 127 ntBASIC11.99□□□□□ -0.49
Smim4Q8C1Q6 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC11.99□□□□□ -0.49
Smim4Q8C1Q6 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smim4Q8C1Q6 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smim4Q8C1Q6 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smim4Q8C1Q6 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smim4Q8C1Q6 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Smim4Q8C1Q6 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Smim4Q8C1Q6 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smim4Q8C1Q6 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Smim4Q8C1Q6 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smim4Q8C1Q6 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Smim4Q8C1Q6 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Smim4Q8C1Q6 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC11.99□□□□□ -0.49
Smim4Q8C1Q6 Gm45630-201ENSMUST00000210243 1911 ntBASIC11.99□□□□□ -0.49
Smim4Q8C1Q6 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Smim4Q8C1Q6 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smim4Q8C1Q6 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
Smim4Q8C1Q6 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Smim4Q8C1Q6 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smim4Q8C1Q6 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smim4Q8C1Q6 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smim4Q8C1Q6 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smim4Q8C1Q6 Gm38391-201ENSMUST00000191720 4069 ntBASIC11.99□□□□□ -0.49
Smim4Q8C1Q6 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smim4Q8C1Q6 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Smim4Q8C1Q6 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smim4Q8C1Q6 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Smim4Q8C1Q6 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smim4Q8C1Q6 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smim4Q8C1Q6 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Smim4Q8C1Q6 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Smim4Q8C1Q6 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smim4Q8C1Q6 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Smim4Q8C1Q6 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC11.98□□□□□ -0.49
Smim4Q8C1Q6 AC122901.1-201ENSMUST00000214203 1790 ntBASIC11.98□□□□□ -0.49
Smim4Q8C1Q6 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smim4Q8C1Q6 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smim4Q8C1Q6 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smim4Q8C1Q6 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smim4Q8C1Q6 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smim4Q8C1Q6 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smim4Q8C1Q6 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC11.98□□□□□ -0.49
Smim4Q8C1Q6 Gm14140-201ENSMUST00000119999 995 ntBASIC11.98□□□□□ -0.49
Smim4Q8C1Q6 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC11.98□□□□□ -0.49
Smim4Q8C1Q6 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smim4Q8C1Q6 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC11.98□□□□□ -0.49
Smim4Q8C1Q6 AC154222.1-201ENSMUST00000223882 475 ntBASIC11.98□□□□□ -0.49
Smim4Q8C1Q6 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Smim4Q8C1Q6 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Smim4Q8C1Q6 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms