Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC15.85■□□□□ 0.13
Trim47Q8C0E3 Mir7684-201ENSMUST00000183858 60 ntBASIC15.85■□□□□ 0.13
Trim47Q8C0E3 AC125206.2-201ENSMUST00000217454 574 ntBASIC15.85■□□□□ 0.13
Trim47Q8C0E3 AC102291.3-201ENSMUST00000226566 405 ntBASIC15.85■□□□□ 0.13
Trim47Q8C0E3 Wdyhv1-203ENSMUST00000226889 394 ntBASIC15.85■□□□□ 0.13
Trim47Q8C0E3 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim47Q8C0E3 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim47Q8C0E3 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Trim47Q8C0E3 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim47Q8C0E3 Gm45630-201ENSMUST00000210243 1911 ntBASIC15.85■□□□□ 0.13
Trim47Q8C0E3 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trim47Q8C0E3 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim47Q8C0E3 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Trim47Q8C0E3 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim47Q8C0E3 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC15.85■□□□□ 0.13
Trim47Q8C0E3 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trim47Q8C0E3 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Trim47Q8C0E3 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim47Q8C0E3 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim47Q8C0E3 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Trim47Q8C0E3 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim47Q8C0E3 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim47Q8C0E3 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim47Q8C0E3 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim47Q8C0E3 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim47Q8C0E3 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trim47Q8C0E3 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Trim47Q8C0E3 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Trim47Q8C0E3 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim47Q8C0E3 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim47Q8C0E3 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim47Q8C0E3 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim47Q8C0E3 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim47Q8C0E3 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trim47Q8C0E3 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trim47Q8C0E3 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trim47Q8C0E3 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC15.84■□□□□ 0.13
Trim47Q8C0E3 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim47Q8C0E3 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim47Q8C0E3 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim47Q8C0E3 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Trim47Q8C0E3 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC15.84■□□□□ 0.13
Trim47Q8C0E3 Gm43697-201ENSMUST00000199637 2581 ntBASIC15.84■□□□□ 0.13
Trim47Q8C0E3 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim47Q8C0E3 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC15.84■□□□□ 0.13
Trim47Q8C0E3 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC15.84■□□□□ 0.13
Trim47Q8C0E3 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim47Q8C0E3 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim47Q8C0E3 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC15.84■□□□□ 0.13
Trim47Q8C0E3 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim47Q8C0E3 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC15.84■□□□□ 0.13
Trim47Q8C0E3 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC15.84■□□□□ 0.13
Trim47Q8C0E3 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trim47Q8C0E3 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC15.83■□□□□ 0.13
Trim47Q8C0E3 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC15.83■□□□□ 0.13
Trim47Q8C0E3 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trim47Q8C0E3 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Trim47Q8C0E3 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trim47Q8C0E3 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Trim47Q8C0E3 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trim47Q8C0E3 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Trim47Q8C0E3 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim47Q8C0E3 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.12
Trim47Q8C0E3 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim47Q8C0E3 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim47Q8C0E3 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim47Q8C0E3 Gm4875-201ENSMUST00000118257 786 ntBASIC15.83■□□□□ 0.12
Trim47Q8C0E3 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC15.83■□□□□ 0.12
Trim47Q8C0E3 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trim47Q8C0E3 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC15.83■□□□□ 0.12
Trim47Q8C0E3 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Trim47Q8C0E3 Gm9229-201ENSMUST00000222777 126 ntBASIC15.83■□□□□ 0.12
Trim47Q8C0E3 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim47Q8C0E3 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trim47Q8C0E3 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim47Q8C0E3 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim47Q8C0E3 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim47Q8C0E3 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim47Q8C0E3 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Trim47Q8C0E3 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Trim47Q8C0E3 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim47Q8C0E3 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trim47Q8C0E3 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim47Q8C0E3 Gm38058-201ENSMUST00000194323 4368 ntBASIC15.82■□□□□ 0.12
Trim47Q8C0E3 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim47Q8C0E3 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC15.82■□□□□ 0.12
Trim47Q8C0E3 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim47Q8C0E3 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim47Q8C0E3 Gm15957-201ENSMUST00000118893 974 ntBASIC15.82■□□□□ 0.12
Trim47Q8C0E3 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trim47Q8C0E3 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trim47Q8C0E3 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trim47Q8C0E3 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Trim47Q8C0E3 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Trim47Q8C0E3 Gm5186-201ENSMUST00000218781 920 ntBASIC15.82■□□□□ 0.12
Trim47Q8C0E3 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim47Q8C0E3 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim47Q8C0E3 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trim47Q8C0E3 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trim47Q8C0E3 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms