Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trub1Q8C0D0 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trub1Q8C0D0 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trub1Q8C0D0 Mmp14-206ENSMUST00000225641 3238 ntBASIC14.77□□□□□ -0.05
Trub1Q8C0D0 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Trub1Q8C0D0 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trub1Q8C0D0 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trub1Q8C0D0 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trub1Q8C0D0 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC14.76□□□□□ -0.05
Trub1Q8C0D0 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Trub1Q8C0D0 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC14.76□□□□□ -0.05
Trub1Q8C0D0 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trub1Q8C0D0 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trub1Q8C0D0 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
Trub1Q8C0D0 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trub1Q8C0D0 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trub1Q8C0D0 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trub1Q8C0D0 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trub1Q8C0D0 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trub1Q8C0D0 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC14.76□□□□□ -0.05
Trub1Q8C0D0 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trub1Q8C0D0 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trub1Q8C0D0 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Trub1Q8C0D0 Gm6539-201ENSMUST00000119157 1064 ntBASIC14.76□□□□□ -0.05
Trub1Q8C0D0 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trub1Q8C0D0 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Trub1Q8C0D0 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trub1Q8C0D0 Gm43474-201ENSMUST00000196415 774 ntBASIC14.76□□□□□ -0.05
Trub1Q8C0D0 Gm2213-201ENSMUST00000197485 688 ntBASIC14.76□□□□□ -0.05
Trub1Q8C0D0 Gm18049-201ENSMUST00000208909 581 ntBASIC14.76□□□□□ -0.05
Trub1Q8C0D0 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Trub1Q8C0D0 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trub1Q8C0D0 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Trub1Q8C0D0 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trub1Q8C0D0 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trub1Q8C0D0 Gm28182-201ENSMUST00000188354 2477 ntBASIC14.76□□□□□ -0.05
Trub1Q8C0D0 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trub1Q8C0D0 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
Trub1Q8C0D0 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trub1Q8C0D0 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Trub1Q8C0D0 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trub1Q8C0D0 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trub1Q8C0D0 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trub1Q8C0D0 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trub1Q8C0D0 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trub1Q8C0D0 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trub1Q8C0D0 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trub1Q8C0D0 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trub1Q8C0D0 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trub1Q8C0D0 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC14.75□□□□□ -0.05
Trub1Q8C0D0 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trub1Q8C0D0 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC14.75□□□□□ -0.05
Trub1Q8C0D0 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trub1Q8C0D0 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trub1Q8C0D0 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Trub1Q8C0D0 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trub1Q8C0D0 Gm13823-201ENSMUST00000119930 345 ntBASIC14.75□□□□□ -0.05
Trub1Q8C0D0 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC14.75□□□□□ -0.05
Trub1Q8C0D0 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC14.75□□□□□ -0.05
Trub1Q8C0D0 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC14.75□□□□□ -0.05
Trub1Q8C0D0 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trub1Q8C0D0 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trub1Q8C0D0 Chchd1-203ENSMUST00000224633 557 ntBASIC14.75□□□□□ -0.05
Trub1Q8C0D0 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trub1Q8C0D0 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trub1Q8C0D0 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trub1Q8C0D0 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trub1Q8C0D0 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
Trub1Q8C0D0 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Trub1Q8C0D0 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trub1Q8C0D0 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trub1Q8C0D0 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trub1Q8C0D0 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC14.75□□□□□ -0.05
Trub1Q8C0D0 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC14.75□□□□□ -0.05
Trub1Q8C0D0 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trub1Q8C0D0 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC14.74□□□□□ -0.05
Trub1Q8C0D0 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trub1Q8C0D0 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trub1Q8C0D0 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trub1Q8C0D0 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trub1Q8C0D0 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trub1Q8C0D0 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC14.74□□□□□ -0.05
Trub1Q8C0D0 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Trub1Q8C0D0 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Trub1Q8C0D0 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trub1Q8C0D0 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trub1Q8C0D0 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trub1Q8C0D0 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Trub1Q8C0D0 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trub1Q8C0D0 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trub1Q8C0D0 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trub1Q8C0D0 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trub1Q8C0D0 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC14.74□□□□□ -0.05
Trub1Q8C0D0 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trub1Q8C0D0 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Trub1Q8C0D0 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC14.74□□□□□ -0.05
Trub1Q8C0D0 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC14.74□□□□□ -0.05
Trub1Q8C0D0 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trub1Q8C0D0 Gm8584-201ENSMUST00000171982 758 ntBASIC14.74□□□□□ -0.05
Trub1Q8C0D0 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC14.74□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 72.1 ms