Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cpsf4Q8BQZ5 AC126250.1-201ENSMUST00000228343 1768 ntBASIC13.91□□□□□ -0.18
Cpsf4Q8BQZ5 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cpsf4Q8BQZ5 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
Cpsf4Q8BQZ5 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cpsf4Q8BQZ5 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cpsf4Q8BQZ5 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC13.9□□□□□ -0.18
Cpsf4Q8BQZ5 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cpsf4Q8BQZ5 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Cpsf4Q8BQZ5 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Cpsf4Q8BQZ5 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cpsf4Q8BQZ5 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cpsf4Q8BQZ5 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cpsf4Q8BQZ5 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cpsf4Q8BQZ5 AC167013.2-201ENSMUST00000228520 2684 ntBASIC13.9□□□□□ -0.18
Cpsf4Q8BQZ5 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cpsf4Q8BQZ5 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cpsf4Q8BQZ5 Gm44981-201ENSMUST00000205549 1943 ntBASIC13.9□□□□□ -0.18
Cpsf4Q8BQZ5 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cpsf4Q8BQZ5 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Cpsf4Q8BQZ5 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cpsf4Q8BQZ5 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cpsf4Q8BQZ5 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Cpsf4Q8BQZ5 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC13.9□□□□□ -0.18
Cpsf4Q8BQZ5 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC13.9□□□□□ -0.18
Cpsf4Q8BQZ5 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC13.9□□□□□ -0.18
Cpsf4Q8BQZ5 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cpsf4Q8BQZ5 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cpsf4Q8BQZ5 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC13.9□□□□□ -0.18
Cpsf4Q8BQZ5 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cpsf4Q8BQZ5 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Cpsf4Q8BQZ5 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cpsf4Q8BQZ5 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cpsf4Q8BQZ5 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cpsf4Q8BQZ5 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cpsf4Q8BQZ5 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cpsf4Q8BQZ5 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cpsf4Q8BQZ5 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cpsf4Q8BQZ5 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cpsf4Q8BQZ5 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cpsf4Q8BQZ5 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cpsf4Q8BQZ5 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Cpsf4Q8BQZ5 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Cpsf4Q8BQZ5 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cpsf4Q8BQZ5 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cpsf4Q8BQZ5 AC131743.5-201ENSMUST00000220775 1618 ntBASIC13.9□□□□□ -0.19
Cpsf4Q8BQZ5 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Cpsf4Q8BQZ5 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cpsf4Q8BQZ5 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cpsf4Q8BQZ5 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cpsf4Q8BQZ5 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cpsf4Q8BQZ5 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cpsf4Q8BQZ5 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Cpsf4Q8BQZ5 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Cpsf4Q8BQZ5 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Cpsf4Q8BQZ5 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
Cpsf4Q8BQZ5 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC13.89□□□□□ -0.19
Cpsf4Q8BQZ5 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC13.89□□□□□ -0.19
Cpsf4Q8BQZ5 Gm15483-201ENSMUST00000120338 456 ntBASIC13.89□□□□□ -0.19
Cpsf4Q8BQZ5 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cpsf4Q8BQZ5 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Cpsf4Q8BQZ5 Gm18889-201ENSMUST00000174284 929 ntBASIC13.89□□□□□ -0.19
Cpsf4Q8BQZ5 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Cpsf4Q8BQZ5 Gm8597-201ENSMUST00000191525 1109 ntBASIC13.89□□□□□ -0.19
Cpsf4Q8BQZ5 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC13.89□□□□□ -0.19
Cpsf4Q8BQZ5 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC13.89□□□□□ -0.19
Cpsf4Q8BQZ5 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC13.89□□□□□ -0.19
Cpsf4Q8BQZ5 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC13.89□□□□□ -0.19
Cpsf4Q8BQZ5 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC13.89□□□□□ -0.19
Cpsf4Q8BQZ5 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cpsf4Q8BQZ5 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cpsf4Q8BQZ5 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cpsf4Q8BQZ5 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cpsf4Q8BQZ5 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cpsf4Q8BQZ5 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cpsf4Q8BQZ5 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cpsf4Q8BQZ5 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC13.89□□□□□ -0.19
Cpsf4Q8BQZ5 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC13.89□□□□□ -0.19
Cpsf4Q8BQZ5 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Cpsf4Q8BQZ5 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cpsf4Q8BQZ5 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cpsf4Q8BQZ5 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cpsf4Q8BQZ5 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cpsf4Q8BQZ5 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cpsf4Q8BQZ5 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Cpsf4Q8BQZ5 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cpsf4Q8BQZ5 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cpsf4Q8BQZ5 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cpsf4Q8BQZ5 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cpsf4Q8BQZ5 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cpsf4Q8BQZ5 Gm8096-201ENSMUST00000209921 1591 ntBASIC13.88□□□□□ -0.19
Cpsf4Q8BQZ5 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cpsf4Q8BQZ5 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cpsf4Q8BQZ5 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC13.88□□□□□ -0.19
Cpsf4Q8BQZ5 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cpsf4Q8BQZ5 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cpsf4Q8BQZ5 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cpsf4Q8BQZ5 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cpsf4Q8BQZ5 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cpsf4Q8BQZ5 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms