Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smco3Q8BQM7 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC11.78□□□□□ -0.52
Smco3Q8BQM7 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC11.78□□□□□ -0.52
Smco3Q8BQM7 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smco3Q8BQM7 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smco3Q8BQM7 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smco3Q8BQM7 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smco3Q8BQM7 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC11.78□□□□□ -0.52
Smco3Q8BQM7 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC11.78□□□□□ -0.52
Smco3Q8BQM7 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Smco3Q8BQM7 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Smco3Q8BQM7 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smco3Q8BQM7 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smco3Q8BQM7 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smco3Q8BQM7 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smco3Q8BQM7 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smco3Q8BQM7 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Smco3Q8BQM7 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smco3Q8BQM7 Olfr129-201ENSMUST00000122318 993 ntBASIC11.78□□□□□ -0.52
Smco3Q8BQM7 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Smco3Q8BQM7 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC11.78□□□□□ -0.52
Smco3Q8BQM7 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
Smco3Q8BQM7 Cmtm5-203ENSMUST00000227441 610 ntBASIC11.78□□□□□ -0.52
Smco3Q8BQM7 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Smco3Q8BQM7 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smco3Q8BQM7 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smco3Q8BQM7 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Smco3Q8BQM7 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smco3Q8BQM7 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Smco3Q8BQM7 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smco3Q8BQM7 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smco3Q8BQM7 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smco3Q8BQM7 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smco3Q8BQM7 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smco3Q8BQM7 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smco3Q8BQM7 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Smco3Q8BQM7 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smco3Q8BQM7 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smco3Q8BQM7 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC11.78□□□□□ -0.52
Smco3Q8BQM7 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Smco3Q8BQM7 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smco3Q8BQM7 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Smco3Q8BQM7 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Smco3Q8BQM7 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Smco3Q8BQM7 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Smco3Q8BQM7 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Smco3Q8BQM7 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Smco3Q8BQM7 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Smco3Q8BQM7 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Smco3Q8BQM7 Gm26684-202ENSMUST00000228229 8257 ntBASIC11.77□□□□□ -0.52
Smco3Q8BQM7 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Smco3Q8BQM7 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Smco3Q8BQM7 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Smco3Q8BQM7 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Smco3Q8BQM7 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Smco3Q8BQM7 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Smco3Q8BQM7 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Smco3Q8BQM7 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Smco3Q8BQM7 AC108846.1-201ENSMUST00000214531 513 ntBASIC11.77□□□□□ -0.53
Smco3Q8BQM7 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Smco3Q8BQM7 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC11.77□□□□□ -0.53
Smco3Q8BQM7 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Smco3Q8BQM7 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Smco3Q8BQM7 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Smco3Q8BQM7 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Smco3Q8BQM7 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Smco3Q8BQM7 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Smco3Q8BQM7 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Smco3Q8BQM7 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Smco3Q8BQM7 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Smco3Q8BQM7 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Smco3Q8BQM7 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Smco3Q8BQM7 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Smco3Q8BQM7 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Smco3Q8BQM7 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Smco3Q8BQM7 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Smco3Q8BQM7 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC11.76□□□□□ -0.53
Smco3Q8BQM7 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC11.76□□□□□ -0.53
Smco3Q8BQM7 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Smco3Q8BQM7 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smco3Q8BQM7 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smco3Q8BQM7 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smco3Q8BQM7 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smco3Q8BQM7 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smco3Q8BQM7 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Smco3Q8BQM7 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smco3Q8BQM7 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Smco3Q8BQM7 Gm12500-202ENSMUST00000186471 2428 ntBASIC11.76□□□□□ -0.53
Smco3Q8BQM7 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smco3Q8BQM7 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smco3Q8BQM7 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smco3Q8BQM7 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smco3Q8BQM7 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Smco3Q8BQM7 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smco3Q8BQM7 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC11.76□□□□□ -0.53
Smco3Q8BQM7 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smco3Q8BQM7 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC11.76□□□□□ -0.53
Smco3Q8BQM7 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Smco3Q8BQM7 Gm27742-201ENSMUST00000184667 60 ntBASIC11.76□□□□□ -0.53
Smco3Q8BQM7 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms