Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trim6Q8BGE7 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
Trim6Q8BGE7 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC15.22■□□□□ 0.03
Trim6Q8BGE7 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim6Q8BGE7 Gm8749-201ENSMUST00000117737 331 ntBASIC15.22■□□□□ 0.03
Trim6Q8BGE7 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC15.22■□□□□ 0.03
Trim6Q8BGE7 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC15.22■□□□□ 0.03
Trim6Q8BGE7 Gm4899-201ENSMUST00000178708 719 ntBASIC15.22■□□□□ 0.03
Trim6Q8BGE7 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trim6Q8BGE7 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim6Q8BGE7 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trim6Q8BGE7 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim6Q8BGE7 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trim6Q8BGE7 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim6Q8BGE7 Gm42928-201ENSMUST00000197338 3339 ntBASIC15.22■□□□□ 0.03
Trim6Q8BGE7 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim6Q8BGE7 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trim6Q8BGE7 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim6Q8BGE7 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim6Q8BGE7 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim6Q8BGE7 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim6Q8BGE7 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim6Q8BGE7 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim6Q8BGE7 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trim6Q8BGE7 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim6Q8BGE7 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim6Q8BGE7 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim6Q8BGE7 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
Trim6Q8BGE7 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim6Q8BGE7 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim6Q8BGE7 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim6Q8BGE7 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trim6Q8BGE7 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim6Q8BGE7 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC15.21■□□□□ 0.03
Trim6Q8BGE7 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim6Q8BGE7 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC15.21■□□□□ 0.03
Trim6Q8BGE7 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim6Q8BGE7 Gm13464-201ENSMUST00000119418 935 ntBASIC15.21■□□□□ 0.03
Trim6Q8BGE7 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC15.21■□□□□ 0.03
Trim6Q8BGE7 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trim6Q8BGE7 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC15.21■□□□□ 0.03
Trim6Q8BGE7 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC15.21■□□□□ 0.03
Trim6Q8BGE7 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trim6Q8BGE7 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim6Q8BGE7 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim6Q8BGE7 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim6Q8BGE7 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim6Q8BGE7 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trim6Q8BGE7 Gm38346-201ENSMUST00000192379 2639 ntBASIC15.21■□□□□ 0.03
Trim6Q8BGE7 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trim6Q8BGE7 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Trim6Q8BGE7 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trim6Q8BGE7 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trim6Q8BGE7 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Trim6Q8BGE7 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
Trim6Q8BGE7 AC131743.5-201ENSMUST00000220775 1618 ntBASIC15.21■□□□□ 0.02
Trim6Q8BGE7 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trim6Q8BGE7 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trim6Q8BGE7 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trim6Q8BGE7 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Trim6Q8BGE7 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Trim6Q8BGE7 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim6Q8BGE7 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Trim6Q8BGE7 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim6Q8BGE7 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim6Q8BGE7 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim6Q8BGE7 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim6Q8BGE7 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC15.2■□□□□ 0.02
Trim6Q8BGE7 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Trim6Q8BGE7 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim6Q8BGE7 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim6Q8BGE7 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim6Q8BGE7 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim6Q8BGE7 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
Trim6Q8BGE7 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trim6Q8BGE7 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC15.2■□□□□ 0.02
Trim6Q8BGE7 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC15.2■□□□□ 0.02
Trim6Q8BGE7 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC15.2■□□□□ 0.02
Trim6Q8BGE7 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim6Q8BGE7 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim6Q8BGE7 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim6Q8BGE7 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Trim6Q8BGE7 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim6Q8BGE7 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trim6Q8BGE7 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim6Q8BGE7 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
Trim6Q8BGE7 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim6Q8BGE7 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim6Q8BGE7 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim6Q8BGE7 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC15.2■□□□□ 0.02
Trim6Q8BGE7 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trim6Q8BGE7 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim6Q8BGE7 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
Trim6Q8BGE7 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim6Q8BGE7 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim6Q8BGE7 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim6Q8BGE7 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim6Q8BGE7 Gm8096-201ENSMUST00000209921 1591 ntBASIC15.19■□□□□ 0.02
Trim6Q8BGE7 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim6Q8BGE7 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms