Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Prpf40bQ80W14 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Prpf40bQ80W14 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Prpf40bQ80W14 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Prpf40bQ80W14 Gm43509-201ENSMUST00000196551 2594 ntBASIC16.51■□□□□ 0.23
Prpf40bQ80W14 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Prpf40bQ80W14 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Prpf40bQ80W14 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
Prpf40bQ80W14 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Prpf40bQ80W14 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC16.51■□□□□ 0.23
Prpf40bQ80W14 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Prpf40bQ80W14 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Prpf40bQ80W14 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Prpf40bQ80W14 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Prpf40bQ80W14 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC16.5■□□□□ 0.23
Prpf40bQ80W14 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Prpf40bQ80W14 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Prpf40bQ80W14 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Prpf40bQ80W14 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Prpf40bQ80W14 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Prpf40bQ80W14 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Prpf40bQ80W14 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Prpf40bQ80W14 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Prpf40bQ80W14 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Prpf40bQ80W14 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Prpf40bQ80W14 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
Prpf40bQ80W14 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC16.5■□□□□ 0.23
Prpf40bQ80W14 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Prpf40bQ80W14 Gm11425-201ENSMUST00000119608 498 ntBASIC16.5■□□□□ 0.23
Prpf40bQ80W14 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Prpf40bQ80W14 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Prpf40bQ80W14 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Prpf40bQ80W14 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Prpf40bQ80W14 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Prpf40bQ80W14 Gm9396-201ENSMUST00000076703 567 ntBASIC16.5■□□□□ 0.23
Prpf40bQ80W14 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC16.5■□□□□ 0.23
Prpf40bQ80W14 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Prpf40bQ80W14 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC16.5■□□□□ 0.23
Prpf40bQ80W14 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Prpf40bQ80W14 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Prpf40bQ80W14 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Prpf40bQ80W14 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
Prpf40bQ80W14 Gm43195-201ENSMUST00000200614 2332 ntBASIC16.5■□□□□ 0.23
Prpf40bQ80W14 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Prpf40bQ80W14 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Prpf40bQ80W14 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Prpf40bQ80W14 Gm37912-201ENSMUST00000191895 3076 ntBASIC16.49■□□□□ 0.23
Prpf40bQ80W14 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Prpf40bQ80W14 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Prpf40bQ80W14 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC16.49■□□□□ 0.23
Prpf40bQ80W14 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Prpf40bQ80W14 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Prpf40bQ80W14 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Prpf40bQ80W14 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Prpf40bQ80W14 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Prpf40bQ80W14 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Prpf40bQ80W14 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC16.49■□□□□ 0.23
Prpf40bQ80W14 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Prpf40bQ80W14 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Prpf40bQ80W14 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC16.49■□□□□ 0.23
Prpf40bQ80W14 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Prpf40bQ80W14 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Prpf40bQ80W14 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Prpf40bQ80W14 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Prpf40bQ80W14 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Prpf40bQ80W14 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Prpf40bQ80W14 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Prpf40bQ80W14 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Prpf40bQ80W14 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Prpf40bQ80W14 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Prpf40bQ80W14 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Prpf40bQ80W14 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC16.48■□□□□ 0.23
Prpf40bQ80W14 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Prpf40bQ80W14 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Prpf40bQ80W14 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Prpf40bQ80W14 Gm37297-201ENSMUST00000192974 2384 ntBASIC16.48■□□□□ 0.23
Prpf40bQ80W14 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Prpf40bQ80W14 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Prpf40bQ80W14 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Prpf40bQ80W14 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Prpf40bQ80W14 Gm9522-201ENSMUST00000182394 926 ntBASIC16.48■□□□□ 0.23
Prpf40bQ80W14 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC16.48■□□□□ 0.23
Prpf40bQ80W14 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Prpf40bQ80W14 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Prpf40bQ80W14 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Prpf40bQ80W14 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC16.48■□□□□ 0.23
Prpf40bQ80W14 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Prpf40bQ80W14 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC16.48■□□□□ 0.23
Prpf40bQ80W14 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Prpf40bQ80W14 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC16.48■□□□□ 0.23
Prpf40bQ80W14 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Prpf40bQ80W14 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Prpf40bQ80W14 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Prpf40bQ80W14 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Prpf40bQ80W14 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Prpf40bQ80W14 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Prpf40bQ80W14 AC164565.1-201ENSMUST00000217520 1484 ntBASIC16.48■□□□□ 0.23
Prpf40bQ80W14 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Prpf40bQ80W14 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Prpf40bQ80W14 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms