Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim62Q80V85 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC14.79□□□□□ -0.04
Trim62Q80V85 Gm9229-201ENSMUST00000222777 126 ntBASIC14.79□□□□□ -0.04
Trim62Q80V85 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim62Q80V85 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim62Q80V85 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim62Q80V85 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Trim62Q80V85 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Trim62Q80V85 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim62Q80V85 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim62Q80V85 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim62Q80V85 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Trim62Q80V85 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim62Q80V85 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Trim62Q80V85 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim62Q80V85 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim62Q80V85 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Trim62Q80V85 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim62Q80V85 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim62Q80V85 Ssr1-204ENSMUST00000225319 1610 ntBASIC14.78□□□□□ -0.04
Trim62Q80V85 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim62Q80V85 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Trim62Q80V85 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim62Q80V85 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim62Q80V85 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trim62Q80V85 Mir1897-201ENSMUST00000122581 272 ntBASIC14.78□□□□□ -0.04
Trim62Q80V85 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trim62Q80V85 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim62Q80V85 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trim62Q80V85 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Trim62Q80V85 Ighv1-25-201ENSMUST00000195638 345 ntBASIC14.78□□□□□ -0.04
Trim62Q80V85 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Trim62Q80V85 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC14.78□□□□□ -0.04
Trim62Q80V85 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trim62Q80V85 Rbfox2-208ENSMUST00000227930 1218 ntBASIC14.78□□□□□ -0.04
Trim62Q80V85 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trim62Q80V85 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC14.78□□□□□ -0.04
Trim62Q80V85 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trim62Q80V85 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim62Q80V85 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trim62Q80V85 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Trim62Q80V85 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Trim62Q80V85 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC14.78□□□□□ -0.04
Trim62Q80V85 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim62Q80V85 Gm9856-201ENSMUST00000217077 2578 ntBASIC14.78□□□□□ -0.04
Trim62Q80V85 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim62Q80V85 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim62Q80V85 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim62Q80V85 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
Trim62Q80V85 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim62Q80V85 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim62Q80V85 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim62Q80V85 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Trim62Q80V85 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Trim62Q80V85 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim62Q80V85 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim62Q80V85 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim62Q80V85 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim62Q80V85 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim62Q80V85 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC14.77□□□□□ -0.05
Trim62Q80V85 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC14.77□□□□□ -0.05
Trim62Q80V85 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC14.77□□□□□ -0.05
Trim62Q80V85 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Trim62Q80V85 Gm3436-201ENSMUST00000179930 840 ntBASIC14.77□□□□□ -0.05
Trim62Q80V85 Mir7023-201ENSMUST00000185093 64 ntBASIC14.77□□□□□ -0.05
Trim62Q80V85 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Trim62Q80V85 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Trim62Q80V85 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC14.77□□□□□ -0.05
Trim62Q80V85 Gm46209-201ENSMUST00000217912 553 ntBASIC14.77□□□□□ -0.05
Trim62Q80V85 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim62Q80V85 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim62Q80V85 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Trim62Q80V85 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim62Q80V85 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC14.77□□□□□ -0.05
Trim62Q80V85 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim62Q80V85 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim62Q80V85 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trim62Q80V85 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Trim62Q80V85 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC14.77□□□□□ -0.05
Trim62Q80V85 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Trim62Q80V85 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Trim62Q80V85 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC14.76□□□□□ -0.05
Trim62Q80V85 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim62Q80V85 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim62Q80V85 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim62Q80V85 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim62Q80V85 AC124751.1-201ENSMUST00000222716 1408 ntBASIC14.76□□□□□ -0.05
Trim62Q80V85 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim62Q80V85 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim62Q80V85 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim62Q80V85 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim62Q80V85 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim62Q80V85 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim62Q80V85 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim62Q80V85 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim62Q80V85 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim62Q80V85 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim62Q80V85 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC14.76□□□□□ -0.05
Trim62Q80V85 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC14.76□□□□□ -0.05
Trim62Q80V85 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 58.6 ms