Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scaf4Q6PFF0 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scaf4Q6PFF0 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scaf4Q6PFF0 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Scaf4Q6PFF0 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scaf4Q6PFF0 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scaf4Q6PFF0 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scaf4Q6PFF0 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Scaf4Q6PFF0 Gm7153-201ENSMUST00000117092 455 ntBASIC14.12□□□□□ -0.15
Scaf4Q6PFF0 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Scaf4Q6PFF0 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC14.12□□□□□ -0.15
Scaf4Q6PFF0 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC14.12□□□□□ -0.15
Scaf4Q6PFF0 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Scaf4Q6PFF0 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scaf4Q6PFF0 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Scaf4Q6PFF0 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Scaf4Q6PFF0 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Scaf4Q6PFF0 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scaf4Q6PFF0 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC14.12□□□□□ -0.15
Scaf4Q6PFF0 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Scaf4Q6PFF0 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scaf4Q6PFF0 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Scaf4Q6PFF0 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scaf4Q6PFF0 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC14.12□□□□□ -0.15
Scaf4Q6PFF0 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scaf4Q6PFF0 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scaf4Q6PFF0 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Scaf4Q6PFF0 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Scaf4Q6PFF0 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scaf4Q6PFF0 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Scaf4Q6PFF0 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC14.11□□□□□ -0.15
Scaf4Q6PFF0 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC14.11□□□□□ -0.15
Scaf4Q6PFF0 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Scaf4Q6PFF0 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scaf4Q6PFF0 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scaf4Q6PFF0 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Scaf4Q6PFF0 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Scaf4Q6PFF0 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC14.11□□□□□ -0.15
Scaf4Q6PFF0 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scaf4Q6PFF0 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC14.11□□□□□ -0.15
Scaf4Q6PFF0 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Scaf4Q6PFF0 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Scaf4Q6PFF0 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Scaf4Q6PFF0 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC14.11□□□□□ -0.15
Scaf4Q6PFF0 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC14.11□□□□□ -0.15
Scaf4Q6PFF0 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC14.11□□□□□ -0.15
Scaf4Q6PFF0 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC14.11□□□□□ -0.15
Scaf4Q6PFF0 AV026068-213ENSMUST00000223675 1171 ntBASIC14.11□□□□□ -0.15
Scaf4Q6PFF0 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scaf4Q6PFF0 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC14.11□□□□□ -0.15
Scaf4Q6PFF0 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scaf4Q6PFF0 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scaf4Q6PFF0 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scaf4Q6PFF0 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC14.11□□□□□ -0.15
Scaf4Q6PFF0 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Scaf4Q6PFF0 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Scaf4Q6PFF0 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Scaf4Q6PFF0 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Scaf4Q6PFF0 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scaf4Q6PFF0 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scaf4Q6PFF0 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Scaf4Q6PFF0 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scaf4Q6PFF0 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Scaf4Q6PFF0 Il17rd-203ENSMUST00000225146 3366 ntBASIC14.11□□□□□ -0.15
Scaf4Q6PFF0 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Scaf4Q6PFF0 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Scaf4Q6PFF0 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Scaf4Q6PFF0 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Scaf4Q6PFF0 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scaf4Q6PFF0 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Scaf4Q6PFF0 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Scaf4Q6PFF0 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scaf4Q6PFF0 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC14.1□□□□□ -0.15
Scaf4Q6PFF0 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scaf4Q6PFF0 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scaf4Q6PFF0 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Scaf4Q6PFF0 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
Scaf4Q6PFF0 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Scaf4Q6PFF0 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC14.1□□□□□ -0.15
Scaf4Q6PFF0 Gm27300-201ENSMUST00000184085 97 ntBASIC14.1□□□□□ -0.15
Scaf4Q6PFF0 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Scaf4Q6PFF0 Gm27335-201ENSMUST00000184758 97 ntBASIC14.1□□□□□ -0.15
Scaf4Q6PFF0 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC14.1□□□□□ -0.15
Scaf4Q6PFF0 Gm45098-201ENSMUST00000207179 657 ntBASIC14.1□□□□□ -0.15
Scaf4Q6PFF0 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Scaf4Q6PFF0 Gm45747-201ENSMUST00000212203 999 ntBASIC14.1□□□□□ -0.15
Scaf4Q6PFF0 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC14.1□□□□□ -0.15
Scaf4Q6PFF0 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scaf4Q6PFF0 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scaf4Q6PFF0 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scaf4Q6PFF0 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scaf4Q6PFF0 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC14.1□□□□□ -0.15
Scaf4Q6PFF0 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scaf4Q6PFF0 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Scaf4Q6PFF0 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scaf4Q6PFF0 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scaf4Q6PFF0 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scaf4Q6PFF0 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scaf4Q6PFF0 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scaf4Q6PFF0 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms