Protein–RNA interactions for Protein: Q6PFE3

Rad54b, DNA repair and recombination protein RAD54B, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rad54bQ6PFE3 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rad54bQ6PFE3 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Rad54bQ6PFE3 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Rad54bQ6PFE3 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Rad54bQ6PFE3 Gm12892-201ENSMUST00000117367 1146 ntBASIC14.39□□□□□ -0.11
Rad54bQ6PFE3 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC14.39□□□□□ -0.11
Rad54bQ6PFE3 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC14.39□□□□□ -0.11
Rad54bQ6PFE3 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC14.39□□□□□ -0.11
Rad54bQ6PFE3 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
Rad54bQ6PFE3 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC14.39□□□□□ -0.11
Rad54bQ6PFE3 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rad54bQ6PFE3 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Rad54bQ6PFE3 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rad54bQ6PFE3 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rad54bQ6PFE3 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rad54bQ6PFE3 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rad54bQ6PFE3 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rad54bQ6PFE3 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rad54bQ6PFE3 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC14.39□□□□□ -0.11
Rad54bQ6PFE3 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rad54bQ6PFE3 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rad54bQ6PFE3 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rad54bQ6PFE3 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rad54bQ6PFE3 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rad54bQ6PFE3 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rad54bQ6PFE3 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rad54bQ6PFE3 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC14.38□□□□□ -0.11
Rad54bQ6PFE3 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rad54bQ6PFE3 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rad54bQ6PFE3 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rad54bQ6PFE3 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rad54bQ6PFE3 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rad54bQ6PFE3 Psmb5-202ENSMUST00000227257 622 ntBASIC14.38□□□□□ -0.11
Rad54bQ6PFE3 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rad54bQ6PFE3 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rad54bQ6PFE3 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.38□□□□□ -0.11
Rad54bQ6PFE3 AC164107.1-201ENSMUST00000227730 2161 ntBASIC14.38□□□□□ -0.11
Rad54bQ6PFE3 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rad54bQ6PFE3 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rad54bQ6PFE3 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rad54bQ6PFE3 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rad54bQ6PFE3 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rad54bQ6PFE3 Ntrk2-209ENSMUST00000225950 2640 ntBASIC14.38□□□□□ -0.11
Rad54bQ6PFE3 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Rad54bQ6PFE3 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC14.38□□□□□ -0.11
Rad54bQ6PFE3 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Rad54bQ6PFE3 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rad54bQ6PFE3 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC14.38□□□□□ -0.11
Rad54bQ6PFE3 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rad54bQ6PFE3 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rad54bQ6PFE3 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rad54bQ6PFE3 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rad54bQ6PFE3 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rad54bQ6PFE3 Mmp14-206ENSMUST00000225641 3238 ntBASIC14.37□□□□□ -0.11
Rad54bQ6PFE3 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Rad54bQ6PFE3 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Rad54bQ6PFE3 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rad54bQ6PFE3 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rad54bQ6PFE3 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rad54bQ6PFE3 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rad54bQ6PFE3 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rad54bQ6PFE3 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rad54bQ6PFE3 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rad54bQ6PFE3 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rad54bQ6PFE3 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rad54bQ6PFE3 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rad54bQ6PFE3 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Rad54bQ6PFE3 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC14.37□□□□□ -0.11
Rad54bQ6PFE3 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC14.37□□□□□ -0.11
Rad54bQ6PFE3 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rad54bQ6PFE3 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rad54bQ6PFE3 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rad54bQ6PFE3 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC14.37□□□□□ -0.11
Rad54bQ6PFE3 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC14.37□□□□□ -0.11
Rad54bQ6PFE3 Gm6973-201ENSMUST00000117080 721 ntBASIC14.37□□□□□ -0.11
Rad54bQ6PFE3 Gm15427-201ENSMUST00000117288 531 ntBASIC14.37□□□□□ -0.11
Rad54bQ6PFE3 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC14.37□□□□□ -0.11
Rad54bQ6PFE3 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rad54bQ6PFE3 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC14.37□□□□□ -0.11
Rad54bQ6PFE3 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Rad54bQ6PFE3 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rad54bQ6PFE3 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC14.37□□□□□ -0.11
Rad54bQ6PFE3 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Rad54bQ6PFE3 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rad54bQ6PFE3 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rad54bQ6PFE3 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rad54bQ6PFE3 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rad54bQ6PFE3 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Rad54bQ6PFE3 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rad54bQ6PFE3 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rad54bQ6PFE3 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rad54bQ6PFE3 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rad54bQ6PFE3 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rad54bQ6PFE3 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rad54bQ6PFE3 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Rad54bQ6PFE3 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rad54bQ6PFE3 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Rad54bQ6PFE3 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC14.36□□□□□ -0.11
Rad54bQ6PFE3 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rad54bQ6PFE3 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms