Protein–RNA interactions for Protein: Q6PD21

Shb, SH2 domain-containing adapter protein B, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShbQ6PD21 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC15.24■□□□□ 0.03
ShbQ6PD21 Gm42929-201ENSMUST00000198374 1286 ntBASIC15.24■□□□□ 0.03
ShbQ6PD21 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
ShbQ6PD21 Gm5363-201ENSMUST00000211927 938 ntBASIC15.24■□□□□ 0.03
ShbQ6PD21 Gm6082-201ENSMUST00000215204 454 ntBASIC15.24■□□□□ 0.03
ShbQ6PD21 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ShbQ6PD21 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
ShbQ6PD21 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ShbQ6PD21 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ShbQ6PD21 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ShbQ6PD21 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ShbQ6PD21 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
ShbQ6PD21 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
ShbQ6PD21 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ShbQ6PD21 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
ShbQ6PD21 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ShbQ6PD21 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
ShbQ6PD21 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ShbQ6PD21 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC15.23■□□□□ 0.03
ShbQ6PD21 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ShbQ6PD21 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
ShbQ6PD21 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
ShbQ6PD21 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ShbQ6PD21 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
ShbQ6PD21 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ShbQ6PD21 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
ShbQ6PD21 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ShbQ6PD21 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC15.23■□□□□ 0.03
ShbQ6PD21 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
ShbQ6PD21 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
ShbQ6PD21 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC15.23■□□□□ 0.03
ShbQ6PD21 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC15.23■□□□□ 0.03
ShbQ6PD21 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
ShbQ6PD21 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
ShbQ6PD21 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC15.23■□□□□ 0.03
ShbQ6PD21 Nsd1-205ENSMUST00000224693 852 ntBASIC15.23■□□□□ 0.03
ShbQ6PD21 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC15.23■□□□□ 0.03
ShbQ6PD21 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
ShbQ6PD21 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ShbQ6PD21 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ShbQ6PD21 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
ShbQ6PD21 Gm42901-201ENSMUST00000197735 3171 ntBASIC15.22■□□□□ 0.03
ShbQ6PD21 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ShbQ6PD21 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ShbQ6PD21 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ShbQ6PD21 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
ShbQ6PD21 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ShbQ6PD21 Gm43289-201ENSMUST00000200537 1475 ntBASIC15.22■□□□□ 0.03
ShbQ6PD21 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC15.22■□□□□ 0.03
ShbQ6PD21 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ShbQ6PD21 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ShbQ6PD21 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC15.22■□□□□ 0.03
ShbQ6PD21 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
ShbQ6PD21 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
ShbQ6PD21 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ShbQ6PD21 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ShbQ6PD21 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
ShbQ6PD21 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
ShbQ6PD21 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
ShbQ6PD21 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
ShbQ6PD21 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
ShbQ6PD21 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
ShbQ6PD21 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ShbQ6PD21 Gm15370-201ENSMUST00000117158 253 ntBASIC15.22■□□□□ 0.03
ShbQ6PD21 Gm13297-201ENSMUST00000120205 934 ntBASIC15.22■□□□□ 0.03
ShbQ6PD21 Gm14381-201ENSMUST00000122105 414 ntBASIC15.22■□□□□ 0.03
ShbQ6PD21 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ShbQ6PD21 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC15.22■□□□□ 0.03
ShbQ6PD21 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ShbQ6PD21 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC15.22■□□□□ 0.03
ShbQ6PD21 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ShbQ6PD21 Gm25668-201ENSMUST00000157700 129 ntBASIC15.22■□□□□ 0.03
ShbQ6PD21 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC15.22■□□□□ 0.03
ShbQ6PD21 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC15.22■□□□□ 0.03
ShbQ6PD21 Gm16505-201ENSMUST00000179981 232 ntBASIC15.22■□□□□ 0.03
ShbQ6PD21 Gm43138-201ENSMUST00000199123 708 ntBASIC15.22■□□□□ 0.03
ShbQ6PD21 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ShbQ6PD21 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
ShbQ6PD21 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
ShbQ6PD21 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
ShbQ6PD21 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ShbQ6PD21 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ShbQ6PD21 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
ShbQ6PD21 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
ShbQ6PD21 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
ShbQ6PD21 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ShbQ6PD21 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
ShbQ6PD21 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ShbQ6PD21 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
ShbQ6PD21 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
ShbQ6PD21 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ShbQ6PD21 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC15.21■□□□□ 0.03
ShbQ6PD21 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC15.21■□□□□ 0.03
ShbQ6PD21 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
ShbQ6PD21 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC15.21■□□□□ 0.03
ShbQ6PD21 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC15.21■□□□□ 0.03
ShbQ6PD21 Gm4935-201ENSMUST00000221316 1198 ntBASIC15.21■□□□□ 0.03
ShbQ6PD21 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
ShbQ6PD21 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
ShbQ6PD21 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms