Protein–RNA interactions for Protein: Q64739

Col11a2, Collagen alpha-2(XI) chain, mousemouse

Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a2Q64739 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Col11a2Q64739 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col11a2Q64739 AC153366.2-201ENSMUST00000219461 1984 ntBASIC16.97■□□□□ 0.31
Col11a2Q64739 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Col11a2Q64739 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Col11a2Q64739 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Col11a2Q64739 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC16.96■□□□□ 0.31
Col11a2Q64739 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC16.96■□□□□ 0.31
Col11a2Q64739 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Col11a2Q64739 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC16.96■□□□□ 0.31
Col11a2Q64739 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC16.96■□□□□ 0.31
Col11a2Q64739 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC16.96■□□□□ 0.31
Col11a2Q64739 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Col11a2Q64739 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Col11a2Q64739 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC16.96■□□□□ 0.31
Col11a2Q64739 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Col11a2Q64739 Gm9755-201ENSMUST00000032981 1356 ntBASIC16.96■□□□□ 0.31
Col11a2Q64739 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Col11a2Q64739 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Col11a2Q64739 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Col11a2Q64739 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Col11a2Q64739 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Col11a2Q64739 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Col11a2Q64739 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Col11a2Q64739 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC16.96■□□□□ 0.31
Col11a2Q64739 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Col11a2Q64739 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Col11a2Q64739 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Col11a2Q64739 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC16.96■□□□□ 0.31
Col11a2Q64739 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC16.96■□□□□ 0.3
Col11a2Q64739 Gm18630-201ENSMUST00000222109 1397 ntBASIC16.96■□□□□ 0.3
Col11a2Q64739 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
Col11a2Q64739 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
Col11a2Q64739 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
Col11a2Q64739 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC16.96■□□□□ 0.3
Col11a2Q64739 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC16.96■□□□□ 0.3
Col11a2Q64739 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC16.96■□□□□ 0.3
Col11a2Q64739 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC16.96■□□□□ 0.3
Col11a2Q64739 CT573034.1-201ENSMUST00000222983 313 ntBASIC16.96■□□□□ 0.3
Col11a2Q64739 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Col11a2Q64739 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Col11a2Q64739 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col11a2Q64739 Gm26917-202ENSMUST00000192833 3329 ntBASIC16.95■□□□□ 0.3
Col11a2Q64739 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC16.95■□□□□ 0.3
Col11a2Q64739 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col11a2Q64739 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Col11a2Q64739 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col11a2Q64739 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC16.95■□□□□ 0.3
Col11a2Q64739 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col11a2Q64739 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Col11a2Q64739 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC16.95■□□□□ 0.3
Col11a2Q64739 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col11a2Q64739 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Col11a2Q64739 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC16.95■□□□□ 0.3
Col11a2Q64739 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col11a2Q64739 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Col11a2Q64739 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col11a2Q64739 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Col11a2Q64739 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC16.95■□□□□ 0.3
Col11a2Q64739 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Col11a2Q64739 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col11a2Q64739 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col11a2Q64739 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col11a2Q64739 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Col11a2Q64739 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col11a2Q64739 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col11a2Q64739 Camk2g-217ENSMUST00000226630 1937 ntBASIC16.94■□□□□ 0.3
Col11a2Q64739 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col11a2Q64739 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
Col11a2Q64739 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col11a2Q64739 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col11a2Q64739 Gm12997-201ENSMUST00000120207 640 ntBASIC16.94■□□□□ 0.3
Col11a2Q64739 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC16.94■□□□□ 0.3
Col11a2Q64739 Gm25261-201ENSMUST00000157416 134 ntBASIC16.94■□□□□ 0.3
Col11a2Q64739 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Col11a2Q64739 Gm7046-201ENSMUST00000221351 977 ntBASIC16.94■□□□□ 0.3
Col11a2Q64739 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col11a2Q64739 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col11a2Q64739 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col11a2Q64739 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col11a2Q64739 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col11a2Q64739 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Col11a2Q64739 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col11a2Q64739 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col11a2Q64739 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col11a2Q64739 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC16.93■□□□□ 0.3
Col11a2Q64739 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC16.93■□□□□ 0.3
Col11a2Q64739 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Col11a2Q64739 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC16.93■□□□□ 0.3
Col11a2Q64739 Rps4l-202ENSMUST00000204242 789 ntBASIC16.93■□□□□ 0.3
Col11a2Q64739 Gm6082-201ENSMUST00000215204 454 ntBASIC16.93■□□□□ 0.3
Col11a2Q64739 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC16.93■□□□□ 0.3
Col11a2Q64739 Gm2824-203ENSMUST00000226189 1228 ntBASIC16.93■□□□□ 0.3
Col11a2Q64739 Rn7sk-201ENSMUST00000083103 331 ntBASIC16.93■□□□□ 0.3
Col11a2Q64739 Gm26315-201ENSMUST00000083890 321 ntBASIC16.93■□□□□ 0.3
Col11a2Q64739 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col11a2Q64739 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Col11a2Q64739 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Col11a2Q64739 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col11a2Q64739 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms