Protein–RNA interactions for Protein: Q61412

Vsx2, Visual system homeobox 2, mousemouse

Predictions only

Length 361 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx2Q61412 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
Vsx2Q61412 CT025626.1-201ENSMUST00000223735 1455 ntBASIC13.98□□□□□ -0.17
Vsx2Q61412 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vsx2Q61412 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Vsx2Q61412 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vsx2Q61412 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vsx2Q61412 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
Vsx2Q61412 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vsx2Q61412 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vsx2Q61412 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vsx2Q61412 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vsx2Q61412 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vsx2Q61412 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vsx2Q61412 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Vsx2Q61412 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vsx2Q61412 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Vsx2Q61412 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vsx2Q61412 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Vsx2Q61412 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vsx2Q61412 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vsx2Q61412 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vsx2Q61412 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC13.97□□□□□ -0.17
Vsx2Q61412 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Vsx2Q61412 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Vsx2Q61412 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC13.97□□□□□ -0.17
Vsx2Q61412 Gm23547-201ENSMUST00000158210 271 ntBASIC13.97□□□□□ -0.17
Vsx2Q61412 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC13.97□□□□□ -0.17
Vsx2Q61412 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC13.97□□□□□ -0.17
Vsx2Q61412 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Vsx2Q61412 Gm5312-201ENSMUST00000203728 547 ntBASIC13.97□□□□□ -0.17
Vsx2Q61412 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Vsx2Q61412 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vsx2Q61412 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Vsx2Q61412 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC13.97□□□□□ -0.17
Vsx2Q61412 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vsx2Q61412 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Vsx2Q61412 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Vsx2Q61412 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vsx2Q61412 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vsx2Q61412 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC13.97□□□□□ -0.17
Vsx2Q61412 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Vsx2Q61412 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vsx2Q61412 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC13.97□□□□□ -0.17
Vsx2Q61412 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vsx2Q61412 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vsx2Q61412 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vsx2Q61412 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vsx2Q61412 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vsx2Q61412 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vsx2Q61412 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Vsx2Q61412 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vsx2Q61412 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vsx2Q61412 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Vsx2Q61412 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Vsx2Q61412 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vsx2Q61412 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Vsx2Q61412 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC13.96□□□□□ -0.17
Vsx2Q61412 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Vsx2Q61412 Gm18737-201ENSMUST00000173594 937 ntBASIC13.96□□□□□ -0.17
Vsx2Q61412 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC13.96□□□□□ -0.17
Vsx2Q61412 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Vsx2Q61412 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC13.96□□□□□ -0.17
Vsx2Q61412 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vsx2Q61412 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vsx2Q61412 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vsx2Q61412 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vsx2Q61412 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vsx2Q61412 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vsx2Q61412 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vsx2Q61412 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.18
Vsx2Q61412 Tcf21-202ENSMUST00000218002 1788 ntBASIC13.96□□□□□ -0.18
Vsx2Q61412 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Vsx2Q61412 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
Vsx2Q61412 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Vsx2Q61412 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Vsx2Q61412 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Vsx2Q61412 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC13.95□□□□□ -0.18
Vsx2Q61412 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vsx2Q61412 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Vsx2Q61412 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vsx2Q61412 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC13.95□□□□□ -0.18
Vsx2Q61412 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Vsx2Q61412 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vsx2Q61412 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vsx2Q61412 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vsx2Q61412 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vsx2Q61412 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC13.95□□□□□ -0.18
Vsx2Q61412 Trav13-3-201ENSMUST00000117226 336 ntBASIC13.95□□□□□ -0.18
Vsx2Q61412 Gm13464-201ENSMUST00000119418 935 ntBASIC13.95□□□□□ -0.18
Vsx2Q61412 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vsx2Q61412 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC13.95□□□□□ -0.18
Vsx2Q61412 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vsx2Q61412 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC13.95□□□□□ -0.18
Vsx2Q61412 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Vsx2Q61412 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC13.95□□□□□ -0.18
Vsx2Q61412 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vsx2Q61412 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vsx2Q61412 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC13.95□□□□□ -0.18
Vsx2Q61412 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Vsx2Q61412 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms