Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC15.85■□□□□ 0.13
Ift88Q61371 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ift88Q61371 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ift88Q61371 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ift88Q61371 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ift88Q61371 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ift88Q61371 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ift88Q61371 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ift88Q61371 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ift88Q61371 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ift88Q61371 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Ift88Q61371 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC15.84■□□□□ 0.13
Ift88Q61371 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ift88Q61371 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ift88Q61371 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ift88Q61371 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ift88Q61371 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ift88Q61371 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ift88Q61371 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ift88Q61371 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ift88Q61371 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Ift88Q61371 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ift88Q61371 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ift88Q61371 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ift88Q61371 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ift88Q61371 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ift88Q61371 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ift88Q61371 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ift88Q61371 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ift88Q61371 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ift88Q61371 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC15.84■□□□□ 0.13
Ift88Q61371 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ift88Q61371 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ift88Q61371 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Ift88Q61371 Gm10710-201ENSMUST00000047876 3971 ntBASIC15.84■□□□□ 0.13
Ift88Q61371 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ift88Q61371 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC15.84■□□□□ 0.13
Ift88Q61371 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Ift88Q61371 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Ift88Q61371 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Ift88Q61371 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Ift88Q61371 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Ift88Q61371 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
Ift88Q61371 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.13
Ift88Q61371 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC15.83■□□□□ 0.13
Ift88Q61371 Ksr1-207ENSMUST00000226282 5260 ntBASIC15.83■□□□□ 0.12
Ift88Q61371 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ift88Q61371 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ift88Q61371 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ift88Q61371 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
Ift88Q61371 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC15.83■□□□□ 0.12
Ift88Q61371 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
Ift88Q61371 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC15.83■□□□□ 0.12
Ift88Q61371 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
Ift88Q61371 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC15.83■□□□□ 0.12
Ift88Q61371 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Ift88Q61371 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Ift88Q61371 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC15.83■□□□□ 0.12
Ift88Q61371 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC15.83■□□□□ 0.12
Ift88Q61371 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Ift88Q61371 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC15.83■□□□□ 0.12
Ift88Q61371 AC164629.2-201ENSMUST00000217916 270 ntBASIC15.83■□□□□ 0.12
Ift88Q61371 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC15.83■□□□□ 0.12
Ift88Q61371 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ift88Q61371 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC15.83■□□□□ 0.12
Ift88Q61371 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Ift88Q61371 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Ift88Q61371 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ift88Q61371 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC15.83■□□□□ 0.12
Ift88Q61371 Gm13410-201ENSMUST00000117058 1415 ntBASIC15.83■□□□□ 0.12
Ift88Q61371 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ift88Q61371 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Ift88Q61371 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ift88Q61371 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ift88Q61371 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ift88Q61371 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ift88Q61371 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC15.83■□□□□ 0.12
Ift88Q61371 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ift88Q61371 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ift88Q61371 AC122901.1-201ENSMUST00000214203 1790 ntBASIC15.82■□□□□ 0.12
Ift88Q61371 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ift88Q61371 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ift88Q61371 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ift88Q61371 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ift88Q61371 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Ift88Q61371 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ift88Q61371 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
Ift88Q61371 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ift88Q61371 Gm9385-201ENSMUST00000117563 472 ntBASIC15.82■□□□□ 0.12
Ift88Q61371 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC15.82■□□□□ 0.12
Ift88Q61371 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ift88Q61371 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Ift88Q61371 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ift88Q61371 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ift88Q61371 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC15.82■□□□□ 0.12
Ift88Q61371 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ift88Q61371 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ift88Q61371 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ift88Q61371 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC15.82■□□□□ 0.12
Ift88Q61371 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms