Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Six4Q61321 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Six4Q61321 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Six4Q61321 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Six4Q61321 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Six4Q61321 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Six4Q61321 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Six4Q61321 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Six4Q61321 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Six4Q61321 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
Six4Q61321 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Six4Q61321 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Six4Q61321 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Six4Q61321 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Six4Q61321 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Six4Q61321 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Six4Q61321 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Six4Q61321 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Six4Q61321 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC14.42□□□□□ -0.1
Six4Q61321 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Six4Q61321 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Six4Q61321 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Six4Q61321 Gm6888-201ENSMUST00000221983 706 ntBASIC14.42□□□□□ -0.1
Six4Q61321 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Six4Q61321 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Six4Q61321 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Six4Q61321 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Six4Q61321 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Six4Q61321 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC14.42□□□□□ -0.1
Six4Q61321 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Six4Q61321 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Six4Q61321 AC121801.1-201ENSMUST00000225363 1899 ntBASIC14.42□□□□□ -0.1
Six4Q61321 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Six4Q61321 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Six4Q61321 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Six4Q61321 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Six4Q61321 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Six4Q61321 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Six4Q61321 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Six4Q61321 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Six4Q61321 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Six4Q61321 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Six4Q61321 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Six4Q61321 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Six4Q61321 Gm38102-201ENSMUST00000192791 1935 ntBASIC14.41□□□□□ -0.1
Six4Q61321 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Six4Q61321 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Six4Q61321 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Six4Q61321 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Six4Q61321 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Six4Q61321 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC14.41□□□□□ -0.1
Six4Q61321 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Six4Q61321 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Six4Q61321 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC14.41□□□□□ -0.1
Six4Q61321 Gm25144-201ENSMUST00000179561 110 ntBASIC14.41□□□□□ -0.1
Six4Q61321 Gm25352-201ENSMUST00000179815 110 ntBASIC14.41□□□□□ -0.1
Six4Q61321 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Six4Q61321 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Six4Q61321 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC14.41□□□□□ -0.1
Six4Q61321 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Six4Q61321 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Six4Q61321 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Six4Q61321 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
Six4Q61321 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Six4Q61321 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Six4Q61321 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Six4Q61321 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Six4Q61321 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Six4Q61321 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Six4Q61321 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Six4Q61321 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Six4Q61321 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Six4Q61321 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Six4Q61321 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Six4Q61321 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Six4Q61321 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Six4Q61321 Gm9109-201ENSMUST00000120254 1405 ntBASIC14.41□□□□□ -0.1
Six4Q61321 Gm45667-201ENSMUST00000210380 1316 ntBASIC14.41□□□□□ -0.1
Six4Q61321 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Six4Q61321 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC14.4□□□□□ -0.1
Six4Q61321 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Six4Q61321 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Six4Q61321 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Six4Q61321 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC14.4□□□□□ -0.1
Six4Q61321 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Six4Q61321 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
Six4Q61321 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Six4Q61321 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC14.4□□□□□ -0.1
Six4Q61321 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Six4Q61321 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Six4Q61321 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC14.4□□□□□ -0.1
Six4Q61321 AC126408.1-201ENSMUST00000225184 523 ntBASIC14.4□□□□□ -0.1
Six4Q61321 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Six4Q61321 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Six4Q61321 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Six4Q61321 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Six4Q61321 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Six4Q61321 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Six4Q61321 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Six4Q61321 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 58.6 ms