Protein–RNA interactions for Protein: Q61216

Mre11, Double-strand break repair protein MRE11, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mre11Q61216 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Mre11Q61216 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Mre11Q61216 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Mre11Q61216 Gm37133-201ENSMUST00000192705 1922 ntBASIC17.15■□□□□ 0.34
Mre11Q61216 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
Mre11Q61216 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Mre11Q61216 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Mre11Q61216 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Mre11Q61216 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Mre11Q61216 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC17.15■□□□□ 0.34
Mre11Q61216 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Mre11Q61216 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Mre11Q61216 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Mre11Q61216 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Mre11Q61216 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC17.15■□□□□ 0.34
Mre11Q61216 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Mre11Q61216 Gm7506-201ENSMUST00000207758 815 ntBASIC17.15■□□□□ 0.34
Mre11Q61216 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Mre11Q61216 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Mre11Q61216 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC17.15■□□□□ 0.34
Mre11Q61216 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Mre11Q61216 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Mre11Q61216 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Mre11Q61216 Gm38355-201ENSMUST00000192514 1570 ntBASIC17.15■□□□□ 0.34
Mre11Q61216 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
Mre11Q61216 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Mre11Q61216 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
Mre11Q61216 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.34
Mre11Q61216 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mre11Q61216 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mre11Q61216 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC17.14■□□□□ 0.33
Mre11Q61216 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mre11Q61216 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Mre11Q61216 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mre11Q61216 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Mre11Q61216 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mre11Q61216 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mre11Q61216 Ntrk2-204ENSMUST00000224259 3049 ntBASIC17.14■□□□□ 0.33
Mre11Q61216 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mre11Q61216 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mre11Q61216 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mre11Q61216 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Mre11Q61216 Gm11950-201ENSMUST00000121615 838 ntBASIC17.14■□□□□ 0.33
Mre11Q61216 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC17.14■□□□□ 0.33
Mre11Q61216 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Mre11Q61216 Gm11361-201ENSMUST00000223428 607 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Mre11Q61216 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mre11Q61216 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mre11Q61216 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mre11Q61216 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mre11Q61216 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Mre11Q61216 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mre11Q61216 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mre11Q61216 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mre11Q61216 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Mre11Q61216 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mre11Q61216 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Mre11Q61216 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mre11Q61216 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
Mre11Q61216 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Mre11Q61216 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mre11Q61216 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mre11Q61216 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Mre11Q61216 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Mre11Q61216 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mre11Q61216 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mre11Q61216 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Mre11Q61216 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mre11Q61216 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mre11Q61216 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mre11Q61216 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Mre11Q61216 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mre11Q61216 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mre11Q61216 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Mre11Q61216 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mre11Q61216 Gm15165-201ENSMUST00000118140 502 ntBASIC17.13■□□□□ 0.33
Mre11Q61216 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Mre11Q61216 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Mre11Q61216 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Mre11Q61216 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC17.13■□□□□ 0.33
Mre11Q61216 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Mre11Q61216 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Mre11Q61216 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC17.13■□□□□ 0.33
Mre11Q61216 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mre11Q61216 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mre11Q61216 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Mre11Q61216 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mre11Q61216 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mre11Q61216 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mre11Q61216 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Mre11Q61216 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mre11Q61216 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Mre11Q61216 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mre11Q61216 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mre11Q61216 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Mre11Q61216 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Mre11Q61216 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mre11Q61216 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
Mre11Q61216 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mre11Q61216 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms