Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav5d-4Q5R1F6 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.44
Trav5d-4Q5R1F6 Gm37912-201ENSMUST00000191895 3076 ntBASIC12.33□□□□□ -0.44
Trav5d-4Q5R1F6 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Trav5d-4Q5R1F6 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav5d-4Q5R1F6 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav5d-4Q5R1F6 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav5d-4Q5R1F6 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Trav5d-4Q5R1F6 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav5d-4Q5R1F6 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav5d-4Q5R1F6 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav5d-4Q5R1F6 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav5d-4Q5R1F6 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav5d-4Q5R1F6 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC12.32□□□□□ -0.44
Trav5d-4Q5R1F6 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav5d-4Q5R1F6 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav5d-4Q5R1F6 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav5d-4Q5R1F6 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav5d-4Q5R1F6 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav5d-4Q5R1F6 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
Trav5d-4Q5R1F6 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav5d-4Q5R1F6 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav5d-4Q5R1F6 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav5d-4Q5R1F6 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Trav5d-4Q5R1F6 H2af-ps-201ENSMUST00000119066 295 ntBASIC12.32□□□□□ -0.44
Trav5d-4Q5R1F6 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC12.32□□□□□ -0.44
Trav5d-4Q5R1F6 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav5d-4Q5R1F6 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC12.32□□□□□ -0.44
Trav5d-4Q5R1F6 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav5d-4Q5R1F6 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC12.32□□□□□ -0.44
Trav5d-4Q5R1F6 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC12.32□□□□□ -0.44
Trav5d-4Q5R1F6 Gm43332-201ENSMUST00000202511 1044 ntBASIC12.32□□□□□ -0.44
Trav5d-4Q5R1F6 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav5d-4Q5R1F6 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav5d-4Q5R1F6 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav5d-4Q5R1F6 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Trav5d-4Q5R1F6 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav5d-4Q5R1F6 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav5d-4Q5R1F6 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Trav5d-4Q5R1F6 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav5d-4Q5R1F6 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav5d-4Q5R1F6 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC12.32□□□□□ -0.44
Trav5d-4Q5R1F6 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav5d-4Q5R1F6 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav5d-4Q5R1F6 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav5d-4Q5R1F6 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav5d-4Q5R1F6 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC12.32□□□□□ -0.44
Trav5d-4Q5R1F6 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC12.32□□□□□ -0.44
Trav5d-4Q5R1F6 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav5d-4Q5R1F6 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav5d-4Q5R1F6 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Trav5d-4Q5R1F6 Gm45630-201ENSMUST00000210243 1911 ntBASIC12.31□□□□□ -0.44
Trav5d-4Q5R1F6 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav5d-4Q5R1F6 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav5d-4Q5R1F6 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Trav5d-4Q5R1F6 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav5d-4Q5R1F6 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC12.31□□□□□ -0.44
Trav5d-4Q5R1F6 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC12.31□□□□□ -0.44
Trav5d-4Q5R1F6 Gm6756-201ENSMUST00000180647 1620 ntBASIC12.31□□□□□ -0.44
Trav5d-4Q5R1F6 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav5d-4Q5R1F6 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav5d-4Q5R1F6 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav5d-4Q5R1F6 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC12.31□□□□□ -0.44
Trav5d-4Q5R1F6 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC12.31□□□□□ -0.44
Trav5d-4Q5R1F6 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC12.31□□□□□ -0.44
Trav5d-4Q5R1F6 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav5d-4Q5R1F6 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav5d-4Q5R1F6 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC12.31□□□□□ -0.44
Trav5d-4Q5R1F6 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav5d-4Q5R1F6 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav5d-4Q5R1F6 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Trav5d-4Q5R1F6 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav5d-4Q5R1F6 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC12.31□□□□□ -0.44
Trav5d-4Q5R1F6 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav5d-4Q5R1F6 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav5d-4Q5R1F6 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav5d-4Q5R1F6 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav5d-4Q5R1F6 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav5d-4Q5R1F6 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC12.31□□□□□ -0.44
Trav5d-4Q5R1F6 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav5d-4Q5R1F6 Nrn1-204ENSMUST00000224323 1779 ntBASIC12.3□□□□□ -0.44
Trav5d-4Q5R1F6 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav5d-4Q5R1F6 Gm21451-201ENSMUST00000111062 2775 ntBASIC12.3□□□□□ -0.44
Trav5d-4Q5R1F6 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav5d-4Q5R1F6 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav5d-4Q5R1F6 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav5d-4Q5R1F6 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav5d-4Q5R1F6 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Trav5d-4Q5R1F6 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav5d-4Q5R1F6 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
Trav5d-4Q5R1F6 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav5d-4Q5R1F6 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
Trav5d-4Q5R1F6 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav5d-4Q5R1F6 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav5d-4Q5R1F6 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav5d-4Q5R1F6 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC12.3□□□□□ -0.44
Trav5d-4Q5R1F6 Gm4913-201ENSMUST00000117075 1290 ntBASIC12.3□□□□□ -0.44
Trav5d-4Q5R1F6 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav5d-4Q5R1F6 Gm12017-201ENSMUST00000122453 1003 ntBASIC12.3□□□□□ -0.44
Trav5d-4Q5R1F6 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms