Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Gm3928-201ENSMUST00000121141 1307 ntBASIC11.14□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Gm12500-202ENSMUST00000186471 2428 ntBASIC11.14□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC11.14□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC11.14□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC11.14□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC11.14□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Gm37411-201ENSMUST00000194180 2282 ntBASIC11.14□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC11.14□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC11.13□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC11.13□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Gm8584-201ENSMUST00000171982 758 ntBASIC11.13□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Olfr286-202ENSMUST00000205305 969 ntBASIC11.13□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC11.13□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC11.13□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Gm2420-202ENSMUST00000202224 2249 ntBASIC11.13□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Gm38102-201ENSMUST00000192791 1935 ntBASIC11.13□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC11.13□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC11.13□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC11.12□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Gm8096-201ENSMUST00000209921 1591 ntBASIC11.12□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC11.12□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC11.12□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 AC160338.1-201ENSMUST00000214232 705 ntBASIC11.12□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav15-1-dv6-1Q5R1D2 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms