Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
Shank3Q4ACU6 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Shank3Q4ACU6 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Shank3Q4ACU6 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Shank3Q4ACU6 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC17.43■□□□□ 0.38
Shank3Q4ACU6 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Shank3Q4ACU6 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Shank3Q4ACU6 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Shank3Q4ACU6 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Shank3Q4ACU6 Gm38158-201ENSMUST00000194617 339 ntBASIC17.43■□□□□ 0.38
Shank3Q4ACU6 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Shank3Q4ACU6 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC17.43■□□□□ 0.38
Shank3Q4ACU6 Tyms-ps-201ENSMUST00000219550 915 ntBASIC17.43■□□□□ 0.38
Shank3Q4ACU6 Gm4935-201ENSMUST00000221316 1198 ntBASIC17.43■□□□□ 0.38
Shank3Q4ACU6 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Shank3Q4ACU6 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Shank3Q4ACU6 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Shank3Q4ACU6 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Shank3Q4ACU6 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC17.42■□□□□ 0.38
Shank3Q4ACU6 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Shank3Q4ACU6 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Shank3Q4ACU6 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
Shank3Q4ACU6 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Shank3Q4ACU6 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Shank3Q4ACU6 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Shank3Q4ACU6 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Shank3Q4ACU6 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Shank3Q4ACU6 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Shank3Q4ACU6 Gm22323-201ENSMUST00000103832 109 ntBASIC17.42■□□□□ 0.38
Shank3Q4ACU6 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Shank3Q4ACU6 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Shank3Q4ACU6 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC17.42■□□□□ 0.38
Shank3Q4ACU6 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Shank3Q4ACU6 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Shank3Q4ACU6 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC17.42■□□□□ 0.38
Shank3Q4ACU6 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Shank3Q4ACU6 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Shank3Q4ACU6 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Shank3Q4ACU6 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Shank3Q4ACU6 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Shank3Q4ACU6 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Shank3Q4ACU6 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Shank3Q4ACU6 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Shank3Q4ACU6 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Shank3Q4ACU6 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Shank3Q4ACU6 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Shank3Q4ACU6 Gm13786-201ENSMUST00000122371 333 ntBASIC17.41■□□□□ 0.38
Shank3Q4ACU6 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Shank3Q4ACU6 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Shank3Q4ACU6 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC17.41■□□□□ 0.38
Shank3Q4ACU6 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Shank3Q4ACU6 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC17.41■□□□□ 0.38
Shank3Q4ACU6 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC17.41■□□□□ 0.38
Shank3Q4ACU6 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC17.41■□□□□ 0.38
Shank3Q4ACU6 AC131690.1-201ENSMUST00000218406 374 ntBASIC17.41■□□□□ 0.38
Shank3Q4ACU6 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Shank3Q4ACU6 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Shank3Q4ACU6 Snora73a-201ENSMUST00000082453 205 ntBASIC17.41■□□□□ 0.38
Shank3Q4ACU6 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC17.41■□□□□ 0.38
Shank3Q4ACU6 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Shank3Q4ACU6 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Shank3Q4ACU6 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Shank3Q4ACU6 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Shank3Q4ACU6 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Shank3Q4ACU6 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Shank3Q4ACU6 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Shank3Q4ACU6 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Shank3Q4ACU6 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Shank3Q4ACU6 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Shank3Q4ACU6 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Shank3Q4ACU6 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Shank3Q4ACU6 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Shank3Q4ACU6 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Shank3Q4ACU6 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Shank3Q4ACU6 Gm11618-201ENSMUST00000117946 267 ntBASIC17.41■□□□□ 0.38
Shank3Q4ACU6 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC17.41■□□□□ 0.38
Shank3Q4ACU6 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Shank3Q4ACU6 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
Shank3Q4ACU6 Gm25927-201ENSMUST00000175058 117 ntBASIC17.41■□□□□ 0.38
Shank3Q4ACU6 Gm37922-201ENSMUST00000195596 455 ntBASIC17.41■□□□□ 0.38
Shank3Q4ACU6 AC154462.2-201ENSMUST00000227519 370 ntBASIC17.41■□□□□ 0.38
Shank3Q4ACU6 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Shank3Q4ACU6 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Shank3Q4ACU6 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Shank3Q4ACU6 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Shank3Q4ACU6 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC17.4■□□□□ 0.38
Shank3Q4ACU6 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Shank3Q4ACU6 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Shank3Q4ACU6 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC17.4■□□□□ 0.38
Shank3Q4ACU6 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Shank3Q4ACU6 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Shank3Q4ACU6 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Shank3Q4ACU6 Gm37411-201ENSMUST00000194180 2282 ntBASIC17.4■□□□□ 0.38
Shank3Q4ACU6 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
Shank3Q4ACU6 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Shank3Q4ACU6 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Shank3Q4ACU6 Gm8584-201ENSMUST00000171982 758 ntBASIC17.4■□□□□ 0.38
Shank3Q4ACU6 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Shank3Q4ACU6 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Shank3Q4ACU6 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms