Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Fam196aQ3USH1 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Fam196aQ3USH1 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Fam196aQ3USH1 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Fam196aQ3USH1 Gm15371-201ENSMUST00000117057 784 ntBASIC14.28□□□□□ -0.12
Fam196aQ3USH1 Gm15376-201ENSMUST00000122258 783 ntBASIC14.28□□□□□ -0.12
Fam196aQ3USH1 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Fam196aQ3USH1 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Fam196aQ3USH1 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Fam196aQ3USH1 Gm43758-201ENSMUST00000199500 367 ntBASIC14.28□□□□□ -0.12
Fam196aQ3USH1 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC14.28□□□□□ -0.12
Fam196aQ3USH1 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC14.28□□□□□ -0.12
Fam196aQ3USH1 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC14.28□□□□□ -0.12
Fam196aQ3USH1 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Fam196aQ3USH1 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Fam196aQ3USH1 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Fam196aQ3USH1 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Fam196aQ3USH1 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Fam196aQ3USH1 Mir433-201ENSMUST00000093564 124 ntBASIC14.28□□□□□ -0.12
Fam196aQ3USH1 Prob1-201ENSMUST00000097619 3021 ntBASIC14.28□□□□□ -0.12
Fam196aQ3USH1 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Fam196aQ3USH1 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Fam196aQ3USH1 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Fam196aQ3USH1 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Fam196aQ3USH1 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Fam196aQ3USH1 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Fam196aQ3USH1 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Fam196aQ3USH1 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Fam196aQ3USH1 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Fam196aQ3USH1 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Fam196aQ3USH1 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Fam196aQ3USH1 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Fam196aQ3USH1 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Fam196aQ3USH1 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Fam196aQ3USH1 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC14.27□□□□□ -0.12
Fam196aQ3USH1 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Fam196aQ3USH1 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Fam196aQ3USH1 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Fam196aQ3USH1 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Fam196aQ3USH1 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Fam196aQ3USH1 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Fam196aQ3USH1 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Fam196aQ3USH1 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Fam196aQ3USH1 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Fam196aQ3USH1 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Fam196aQ3USH1 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC14.27□□□□□ -0.12
Fam196aQ3USH1 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Fam196aQ3USH1 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Fam196aQ3USH1 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Fam196aQ3USH1 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Fam196aQ3USH1 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC14.27□□□□□ -0.13
Fam196aQ3USH1 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Fam196aQ3USH1 Gm16342-201ENSMUST00000124025 1025 ntBASIC14.27□□□□□ -0.13
Fam196aQ3USH1 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC14.27□□□□□ -0.13
Fam196aQ3USH1 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Fam196aQ3USH1 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Fam196aQ3USH1 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Fam196aQ3USH1 Mir7070-201ENSMUST00000183657 86 ntBASIC14.27□□□□□ -0.13
Fam196aQ3USH1 Gm9124-201ENSMUST00000191789 1092 ntBASIC14.27□□□□□ -0.13
Fam196aQ3USH1 Gm9113-201ENSMUST00000192510 1018 ntBASIC14.27□□□□□ -0.13
Fam196aQ3USH1 Gm9131-201ENSMUST00000193557 1089 ntBASIC14.27□□□□□ -0.13
Fam196aQ3USH1 Gm9121-201ENSMUST00000193749 1071 ntBASIC14.27□□□□□ -0.13
Fam196aQ3USH1 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC14.27□□□□□ -0.13
Fam196aQ3USH1 CT573034.1-201ENSMUST00000222983 313 ntBASIC14.27□□□□□ -0.13
Fam196aQ3USH1 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Fam196aQ3USH1 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Fam196aQ3USH1 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Fam196aQ3USH1 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Fam196aQ3USH1 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Fam196aQ3USH1 Gm43195-201ENSMUST00000200614 2332 ntBASIC14.27□□□□□ -0.13
Fam196aQ3USH1 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC14.27□□□□□ -0.13
Fam196aQ3USH1 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Fam196aQ3USH1 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Fam196aQ3USH1 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Fam196aQ3USH1 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC14.27□□□□□ -0.13
Fam196aQ3USH1 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Fam196aQ3USH1 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Fam196aQ3USH1 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Fam196aQ3USH1 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Fam196aQ3USH1 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Fam196aQ3USH1 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Fam196aQ3USH1 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Fam196aQ3USH1 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Fam196aQ3USH1 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Fam196aQ3USH1 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Fam196aQ3USH1 Gm42473-201ENSMUST00000201056 2291 ntBASIC14.26□□□□□ -0.13
Fam196aQ3USH1 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Fam196aQ3USH1 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Fam196aQ3USH1 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Fam196aQ3USH1 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Fam196aQ3USH1 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Fam196aQ3USH1 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Fam196aQ3USH1 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Fam196aQ3USH1 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Fam196aQ3USH1 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Fam196aQ3USH1 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Fam196aQ3USH1 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Fam196aQ3USH1 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Fam196aQ3USH1 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Fam196aQ3USH1 Gm15957-201ENSMUST00000118893 974 ntBASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms