Protein–RNA interactions for Protein: Q3UN04

Usp30, Ubiquitin carboxyl-terminal hydrolase 30, mousemouse

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp30Q3UN04 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp30Q3UN04 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Usp30Q3UN04 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Usp30Q3UN04 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp30Q3UN04 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp30Q3UN04 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp30Q3UN04 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp30Q3UN04 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp30Q3UN04 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp30Q3UN04 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp30Q3UN04 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp30Q3UN04 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC14.36□□□□□ -0.11
Usp30Q3UN04 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp30Q3UN04 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC14.36□□□□□ -0.11
Usp30Q3UN04 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp30Q3UN04 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp30Q3UN04 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp30Q3UN04 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Usp30Q3UN04 Gm6745-201ENSMUST00000199216 526 ntBASIC14.36□□□□□ -0.11
Usp30Q3UN04 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC14.36□□□□□ -0.11
Usp30Q3UN04 Gm19220-201ENSMUST00000222682 803 ntBASIC14.36□□□□□ -0.11
Usp30Q3UN04 AC154846.1-201ENSMUST00000226278 862 ntBASIC14.36□□□□□ -0.11
Usp30Q3UN04 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp30Q3UN04 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp30Q3UN04 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp30Q3UN04 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp30Q3UN04 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp30Q3UN04 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Usp30Q3UN04 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp30Q3UN04 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp30Q3UN04 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp30Q3UN04 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Usp30Q3UN04 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp30Q3UN04 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Usp30Q3UN04 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp30Q3UN04 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp30Q3UN04 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Usp30Q3UN04 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp30Q3UN04 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Usp30Q3UN04 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Usp30Q3UN04 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp30Q3UN04 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp30Q3UN04 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC14.35□□□□□ -0.11
Usp30Q3UN04 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Usp30Q3UN04 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC14.35□□□□□ -0.11
Usp30Q3UN04 Gm23984-201ENSMUST00000157139 203 ntBASIC14.35□□□□□ -0.11
Usp30Q3UN04 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC14.35□□□□□ -0.11
Usp30Q3UN04 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC14.35□□□□□ -0.11
Usp30Q3UN04 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC14.35□□□□□ -0.11
Usp30Q3UN04 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC14.35□□□□□ -0.11
Usp30Q3UN04 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC14.35□□□□□ -0.11
Usp30Q3UN04 AC154687.2-201ENSMUST00000223853 640 ntBASIC14.35□□□□□ -0.11
Usp30Q3UN04 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC14.35□□□□□ -0.11
Usp30Q3UN04 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp30Q3UN04 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp30Q3UN04 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Usp30Q3UN04 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Usp30Q3UN04 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Usp30Q3UN04 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp30Q3UN04 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp30Q3UN04 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp30Q3UN04 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp30Q3UN04 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp30Q3UN04 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp30Q3UN04 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp30Q3UN04 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Usp30Q3UN04 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp30Q3UN04 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC14.34□□□□□ -0.11
Usp30Q3UN04 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp30Q3UN04 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Usp30Q3UN04 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp30Q3UN04 Gm13034-201ENSMUST00000121342 3177 ntBASIC14.34□□□□□ -0.11
Usp30Q3UN04 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Usp30Q3UN04 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Usp30Q3UN04 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Usp30Q3UN04 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC14.34□□□□□ -0.11
Usp30Q3UN04 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC14.34□□□□□ -0.11
Usp30Q3UN04 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC14.34□□□□□ -0.11
Usp30Q3UN04 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC14.34□□□□□ -0.11
Usp30Q3UN04 Gm4804-201ENSMUST00000182234 999 ntBASIC14.34□□□□□ -0.11
Usp30Q3UN04 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Usp30Q3UN04 Gm21470-201ENSMUST00000187680 696 ntBASIC14.34□□□□□ -0.11
Usp30Q3UN04 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp30Q3UN04 Gm5425-201ENSMUST00000214125 459 ntBASIC14.34□□□□□ -0.11
Usp30Q3UN04 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC14.34□□□□□ -0.11
Usp30Q3UN04 Gm18624-201ENSMUST00000220966 658 ntBASIC14.34□□□□□ -0.11
Usp30Q3UN04 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp30Q3UN04 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp30Q3UN04 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp30Q3UN04 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp30Q3UN04 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Usp30Q3UN04 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC14.34□□□□□ -0.11
Usp30Q3UN04 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp30Q3UN04 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Usp30Q3UN04 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp30Q3UN04 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp30Q3UN04 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp30Q3UN04 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Usp30Q3UN04 Gm37736-201ENSMUST00000193564 2802 ntBASIC14.33□□□□□ -0.11
Usp30Q3UN04 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms