Protein–RNA interactions for Protein: Q05895

Thbs3, Thrombospondin-3, mousemouse

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs3Q05895 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Thbs3Q05895 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Thbs3Q05895 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Thbs3Q05895 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC12.58□□□□□ -0.4
Thbs3Q05895 Gm6222-201ENSMUST00000120787 396 ntBASIC12.58□□□□□ -0.4
Thbs3Q05895 Gm12882-201ENSMUST00000121696 517 ntBASIC12.58□□□□□ -0.4
Thbs3Q05895 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Thbs3Q05895 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Thbs3Q05895 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC12.58□□□□□ -0.4
Thbs3Q05895 Gm7774-201ENSMUST00000200064 533 ntBASIC12.58□□□□□ -0.4
Thbs3Q05895 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Thbs3Q05895 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Thbs3Q05895 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Thbs3Q05895 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Thbs3Q05895 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Thbs3Q05895 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Thbs3Q05895 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Thbs3Q05895 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Thbs3Q05895 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Thbs3Q05895 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Thbs3Q05895 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC12.58□□□□□ -0.4
Thbs3Q05895 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Thbs3Q05895 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Thbs3Q05895 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Thbs3Q05895 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
Thbs3Q05895 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Thbs3Q05895 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Thbs3Q05895 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC12.57□□□□□ -0.4
Thbs3Q05895 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Thbs3Q05895 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Thbs3Q05895 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Thbs3Q05895 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Thbs3Q05895 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Thbs3Q05895 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Thbs3Q05895 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC12.57□□□□□ -0.4
Thbs3Q05895 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Thbs3Q05895 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Thbs3Q05895 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Thbs3Q05895 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Thbs3Q05895 Gm13823-201ENSMUST00000119930 345 ntBASIC12.57□□□□□ -0.4
Thbs3Q05895 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC12.57□□□□□ -0.4
Thbs3Q05895 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC12.57□□□□□ -0.4
Thbs3Q05895 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC12.57□□□□□ -0.4
Thbs3Q05895 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Thbs3Q05895 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC12.57□□□□□ -0.4
Thbs3Q05895 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Thbs3Q05895 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Thbs3Q05895 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Thbs3Q05895 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Thbs3Q05895 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Thbs3Q05895 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
Thbs3Q05895 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Thbs3Q05895 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC12.57□□□□□ -0.4
Thbs3Q05895 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC12.57□□□□□ -0.4
Thbs3Q05895 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Thbs3Q05895 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Thbs3Q05895 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Thbs3Q05895 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Thbs3Q05895 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Thbs3Q05895 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Thbs3Q05895 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Thbs3Q05895 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Thbs3Q05895 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Thbs3Q05895 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Thbs3Q05895 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Thbs3Q05895 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Thbs3Q05895 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Thbs3Q05895 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC12.56□□□□□ -0.4
Thbs3Q05895 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Thbs3Q05895 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Thbs3Q05895 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Thbs3Q05895 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Thbs3Q05895 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Thbs3Q05895 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Thbs3Q05895 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Thbs3Q05895 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Thbs3Q05895 Mir449b-201ENSMUST00000104833 80 ntBASIC12.56□□□□□ -0.4
Thbs3Q05895 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Thbs3Q05895 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Thbs3Q05895 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Thbs3Q05895 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Thbs3Q05895 Gm10710-201ENSMUST00000047876 3971 ntBASIC12.56□□□□□ -0.4
Thbs3Q05895 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Thbs3Q05895 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Thbs3Q05895 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Thbs3Q05895 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Thbs3Q05895 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Thbs3Q05895 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Thbs3Q05895 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Thbs3Q05895 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Thbs3Q05895 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC12.55□□□□□ -0.4
Thbs3Q05895 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Thbs3Q05895 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Thbs3Q05895 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Thbs3Q05895 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Thbs3Q05895 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Thbs3Q05895 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Thbs3Q05895 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Thbs3Q05895 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Thbs3Q05895 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms