Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Scn1bP97952 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Scn1bP97952 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scn1bP97952 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scn1bP97952 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Scn1bP97952 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scn1bP97952 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Scn1bP97952 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC13.09□□□□□ -0.31
Scn1bP97952 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scn1bP97952 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Scn1bP97952 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scn1bP97952 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scn1bP97952 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Scn1bP97952 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC13.09□□□□□ -0.31
Scn1bP97952 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC13.09□□□□□ -0.31
Scn1bP97952 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Scn1bP97952 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC13.09□□□□□ -0.31
Scn1bP97952 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC13.09□□□□□ -0.31
Scn1bP97952 Gm8318-201ENSMUST00000182954 872 ntBASIC13.09□□□□□ -0.31
Scn1bP97952 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Scn1bP97952 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scn1bP97952 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scn1bP97952 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Scn1bP97952 Mmp14-206ENSMUST00000225641 3238 ntBASIC13.09□□□□□ -0.31
Scn1bP97952 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Scn1bP97952 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Scn1bP97952 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Scn1bP97952 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scn1bP97952 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scn1bP97952 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Scn1bP97952 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scn1bP97952 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Scn1bP97952 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC13.09□□□□□ -0.31
Scn1bP97952 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scn1bP97952 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Scn1bP97952 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Scn1bP97952 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Scn1bP97952 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Scn1bP97952 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Scn1bP97952 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Scn1bP97952 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Scn1bP97952 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Scn1bP97952 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Scn1bP97952 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
Scn1bP97952 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
Scn1bP97952 Gm7935-201ENSMUST00000100555 1278 ntBASIC13.08□□□□□ -0.32
Scn1bP97952 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
Scn1bP97952 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Scn1bP97952 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Scn1bP97952 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Scn1bP97952 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
Scn1bP97952 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC13.08□□□□□ -0.32
Scn1bP97952 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Scn1bP97952 Gm7506-201ENSMUST00000207758 815 ntBASIC13.08□□□□□ -0.32
Scn1bP97952 AC124569.2-201ENSMUST00000225998 818 ntBASIC13.08□□□□□ -0.32
Scn1bP97952 AC117588.1-201ENSMUST00000228510 999 ntBASIC13.08□□□□□ -0.32
Scn1bP97952 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Scn1bP97952 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Scn1bP97952 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Scn1bP97952 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Scn1bP97952 Il17rd-203ENSMUST00000225146 3366 ntBASIC13.08□□□□□ -0.32
Scn1bP97952 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Scn1bP97952 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Scn1bP97952 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Scn1bP97952 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Scn1bP97952 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Scn1bP97952 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Scn1bP97952 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Scn1bP97952 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC13.07□□□□□ -0.32
Scn1bP97952 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Scn1bP97952 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC13.07□□□□□ -0.32
Scn1bP97952 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Scn1bP97952 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Scn1bP97952 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Scn1bP97952 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Scn1bP97952 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Scn1bP97952 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Scn1bP97952 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC13.07□□□□□ -0.32
Scn1bP97952 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Scn1bP97952 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
Scn1bP97952 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC13.07□□□□□ -0.32
Scn1bP97952 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Scn1bP97952 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC13.07□□□□□ -0.32
Scn1bP97952 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Scn1bP97952 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Scn1bP97952 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Scn1bP97952 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Scn1bP97952 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC13.07□□□□□ -0.32
Scn1bP97952 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Scn1bP97952 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC13.07□□□□□ -0.32
Scn1bP97952 Cmtm5-203ENSMUST00000227441 610 ntBASIC13.07□□□□□ -0.32
Scn1bP97952 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Scn1bP97952 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Scn1bP97952 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC13.07□□□□□ -0.32
Scn1bP97952 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Scn1bP97952 Gm10305-201ENSMUST00000195331 2475 ntBASIC13.07□□□□□ -0.32
Scn1bP97952 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Scn1bP97952 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Scn1bP97952 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Scn1bP97952 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 79.7 ms