Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim43bP86448 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim43bP86448 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim43bP86448 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim43bP86448 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Trim43bP86448 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Trim43bP86448 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim43bP86448 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim43bP86448 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim43bP86448 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim43bP86448 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim43bP86448 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim43bP86448 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Trim43bP86448 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim43bP86448 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trim43bP86448 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC14.73□□□□□ -0.05
Trim43bP86448 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim43bP86448 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Trim43bP86448 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Trim43bP86448 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trim43bP86448 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim43bP86448 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC14.73□□□□□ -0.05
Trim43bP86448 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Trim43bP86448 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim43bP86448 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim43bP86448 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim43bP86448 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim43bP86448 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim43bP86448 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim43bP86448 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Trim43bP86448 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim43bP86448 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim43bP86448 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Trim43bP86448 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim43bP86448 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim43bP86448 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC14.73□□□□□ -0.05
Trim43bP86448 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Trim43bP86448 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
Trim43bP86448 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trim43bP86448 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim43bP86448 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
Trim43bP86448 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trim43bP86448 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim43bP86448 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Trim43bP86448 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Trim43bP86448 Gm5184-201ENSMUST00000220417 1702 ntBASIC14.72□□□□□ -0.05
Trim43bP86448 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim43bP86448 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim43bP86448 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Trim43bP86448 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim43bP86448 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trim43bP86448 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC14.72□□□□□ -0.05
Trim43bP86448 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim43bP86448 Gm14822-201ENSMUST00000122247 291 ntBASIC14.72□□□□□ -0.05
Trim43bP86448 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim43bP86448 AC151286.1-201ENSMUST00000198489 145 ntBASIC14.72□□□□□ -0.05
Trim43bP86448 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim43bP86448 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trim43bP86448 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trim43bP86448 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim43bP86448 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim43bP86448 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim43bP86448 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim43bP86448 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trim43bP86448 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim43bP86448 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim43bP86448 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim43bP86448 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Trim43bP86448 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Trim43bP86448 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trim43bP86448 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trim43bP86448 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim43bP86448 Gm42872-201ENSMUST00000200026 1967 ntBASIC14.71□□□□□ -0.05
Trim43bP86448 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC14.71□□□□□ -0.05
Trim43bP86448 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim43bP86448 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC14.71□□□□□ -0.05
Trim43bP86448 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Trim43bP86448 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim43bP86448 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim43bP86448 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim43bP86448 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim43bP86448 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim43bP86448 Mir1895-201ENSMUST00000122615 79 ntBASIC14.71□□□□□ -0.05
Trim43bP86448 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim43bP86448 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC14.71□□□□□ -0.05
Trim43bP86448 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Trim43bP86448 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Trim43bP86448 Gm44492-201ENSMUST00000197012 141 ntBASIC14.71□□□□□ -0.05
Trim43bP86448 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim43bP86448 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim43bP86448 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trim43bP86448 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim43bP86448 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim43bP86448 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trim43bP86448 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trim43bP86448 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim43bP86448 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim43bP86448 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim43bP86448 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trim43bP86448 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms