Protein–RNA interactions for Protein: P62322

Lsm5, U6 snRNA-associated Sm-like protein LSm5, mousemouse

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm5P62322 Trav13-3-201ENSMUST00000117226 336 ntBASIC11.92□□□□□ -0.5
Lsm5P62322 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Lsm5P62322 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC11.92□□□□□ -0.5
Lsm5P62322 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC11.92□□□□□ -0.5
Lsm5P62322 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Lsm5P62322 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
Lsm5P62322 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lsm5P62322 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lsm5P62322 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC11.92□□□□□ -0.5
Lsm5P62322 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lsm5P62322 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lsm5P62322 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Lsm5P62322 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lsm5P62322 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lsm5P62322 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lsm5P62322 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Lsm5P62322 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lsm5P62322 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lsm5P62322 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lsm5P62322 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lsm5P62322 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lsm5P62322 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lsm5P62322 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lsm5P62322 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lsm5P62322 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lsm5P62322 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Lsm5P62322 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lsm5P62322 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lsm5P62322 Gm11405-201ENSMUST00000118689 1556 ntBASIC11.92□□□□□ -0.5
Lsm5P62322 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lsm5P62322 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Lsm5P62322 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lsm5P62322 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Lsm5P62322 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lsm5P62322 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lsm5P62322 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lsm5P62322 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Lsm5P62322 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lsm5P62322 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC11.91□□□□□ -0.5
Lsm5P62322 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Lsm5P62322 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Lsm5P62322 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC11.91□□□□□ -0.5
Lsm5P62322 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Lsm5P62322 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Lsm5P62322 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Lsm5P62322 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC11.91□□□□□ -0.5
Lsm5P62322 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lsm5P62322 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC11.91□□□□□ -0.5
Lsm5P62322 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lsm5P62322 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC11.91□□□□□ -0.5
Lsm5P62322 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
Lsm5P62322 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Lsm5P62322 Gm38094-201ENSMUST00000195864 2978 ntBASIC11.91□□□□□ -0.5
Lsm5P62322 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lsm5P62322 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lsm5P62322 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lsm5P62322 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Lsm5P62322 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Lsm5P62322 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC11.91□□□□□ -0.5
Lsm5P62322 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lsm5P62322 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lsm5P62322 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lsm5P62322 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lsm5P62322 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Lsm5P62322 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lsm5P62322 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Lsm5P62322 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lsm5P62322 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lsm5P62322 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
Lsm5P62322 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lsm5P62322 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lsm5P62322 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lsm5P62322 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lsm5P62322 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Lsm5P62322 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Lsm5P62322 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lsm5P62322 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Lsm5P62322 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Lsm5P62322 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lsm5P62322 Gm37411-201ENSMUST00000194180 2282 ntBASIC11.9□□□□□ -0.5
Lsm5P62322 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Lsm5P62322 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lsm5P62322 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lsm5P62322 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lsm5P62322 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Lsm5P62322 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
Lsm5P62322 Gm45630-201ENSMUST00000210243 1911 ntBASIC11.9□□□□□ -0.5
Lsm5P62322 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lsm5P62322 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lsm5P62322 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lsm5P62322 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lsm5P62322 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Lsm5P62322 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lsm5P62322 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC11.9□□□□□ -0.5
Lsm5P62322 Gm8097-201ENSMUST00000117903 829 ntBASIC11.9□□□□□ -0.5
Lsm5P62322 Gm6433-201ENSMUST00000118634 875 ntBASIC11.9□□□□□ -0.5
Lsm5P62322 Gm15565-201ENSMUST00000118890 427 ntBASIC11.9□□□□□ -0.5
Lsm5P62322 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC11.9□□□□□ -0.5
Lsm5P62322 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC11.9□□□□□ -0.5
Lsm5P62322 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC11.9□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms