Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cks1bP61025 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cks1bP61025 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cks1bP61025 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cks1bP61025 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cks1bP61025 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cks1bP61025 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cks1bP61025 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cks1bP61025 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cks1bP61025 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cks1bP61025 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Cks1bP61025 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Cks1bP61025 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cks1bP61025 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cks1bP61025 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cks1bP61025 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cks1bP61025 Gm20633-201ENSMUST00000176742 2831 ntBASIC10.24□□□□□ -0.77
Cks1bP61025 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC10.24□□□□□ -0.77
Cks1bP61025 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Cks1bP61025 Gm7114-201ENSMUST00000190159 1789 ntBASIC10.24□□□□□ -0.77
Cks1bP61025 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cks1bP61025 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cks1bP61025 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cks1bP61025 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC10.24□□□□□ -0.77
Cks1bP61025 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Cks1bP61025 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC10.23□□□□□ -0.77
Cks1bP61025 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC10.23□□□□□ -0.77
Cks1bP61025 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cks1bP61025 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cks1bP61025 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cks1bP61025 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cks1bP61025 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Cks1bP61025 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cks1bP61025 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cks1bP61025 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cks1bP61025 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cks1bP61025 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Cks1bP61025 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Cks1bP61025 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cks1bP61025 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Cks1bP61025 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Cks1bP61025 Gm11950-201ENSMUST00000121615 838 ntBASIC10.23□□□□□ -0.77
Cks1bP61025 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Cks1bP61025 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cks1bP61025 Gm25016-201ENSMUST00000158399 131 ntBASIC10.23□□□□□ -0.77
Cks1bP61025 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Cks1bP61025 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Cks1bP61025 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cks1bP61025 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cks1bP61025 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cks1bP61025 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cks1bP61025 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cks1bP61025 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC10.23□□□□□ -0.77
Cks1bP61025 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cks1bP61025 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cks1bP61025 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cks1bP61025 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cks1bP61025 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC10.23□□□□□ -0.77
Cks1bP61025 Gm43721-201ENSMUST00000199677 2313 ntBASIC10.23□□□□□ -0.77
Cks1bP61025 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cks1bP61025 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Cks1bP61025 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC10.23□□□□□ -0.77
Cks1bP61025 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cks1bP61025 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cks1bP61025 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Cks1bP61025 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cks1bP61025 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cks1bP61025 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Cks1bP61025 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cks1bP61025 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Cks1bP61025 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC10.23□□□□□ -0.77
Cks1bP61025 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cks1bP61025 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cks1bP61025 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cks1bP61025 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cks1bP61025 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cks1bP61025 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cks1bP61025 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cks1bP61025 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC10.22□□□□□ -0.77
Cks1bP61025 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cks1bP61025 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cks1bP61025 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Cks1bP61025 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC10.22□□□□□ -0.77
Cks1bP61025 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cks1bP61025 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cks1bP61025 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Cks1bP61025 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cks1bP61025 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cks1bP61025 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Cks1bP61025 Gm13312-201ENSMUST00000119631 718 ntBASIC10.22□□□□□ -0.77
Cks1bP61025 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Cks1bP61025 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Cks1bP61025 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Cks1bP61025 AC160980.1-201ENSMUST00000224136 970 ntBASIC10.22□□□□□ -0.77
Cks1bP61025 AC127349.1-201ENSMUST00000224590 266 ntBASIC10.22□□□□□ -0.77
Cks1bP61025 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC10.22□□□□□ -0.77
Cks1bP61025 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cks1bP61025 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cks1bP61025 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Cks1bP61025 Gm42480-201ENSMUST00000198434 2595 ntBASIC10.22□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms