Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nup43P59235 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Nup43P59235 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nup43P59235 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nup43P59235 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Nup43P59235 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nup43P59235 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nup43P59235 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Nup43P59235 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Nup43P59235 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nup43P59235 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nup43P59235 Gm10676-201ENSMUST00000098778 3221 ntBASIC13.52□□□□□ -0.24
Nup43P59235 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nup43P59235 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Nup43P59235 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Nup43P59235 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC13.52□□□□□ -0.25
Nup43P59235 Gm5566-201ENSMUST00000116118 459 ntBASIC13.52□□□□□ -0.25
Nup43P59235 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC13.52□□□□□ -0.25
Nup43P59235 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC13.52□□□□□ -0.25
Nup43P59235 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Nup43P59235 Gm9719-201ENSMUST00000162765 543 ntBASIC13.52□□□□□ -0.25
Nup43P59235 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC13.52□□□□□ -0.25
Nup43P59235 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Nup43P59235 AC139382.1-201ENSMUST00000221402 498 ntBASIC13.52□□□□□ -0.25
Nup43P59235 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Nup43P59235 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Nup43P59235 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nup43P59235 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC13.52□□□□□ -0.25
Nup43P59235 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Nup43P59235 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nup43P59235 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nup43P59235 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC13.52□□□□□ -0.25
Nup43P59235 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Nup43P59235 Ksr1-207ENSMUST00000226282 5260 ntBASIC13.52□□□□□ -0.25
Nup43P59235 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nup43P59235 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Nup43P59235 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.25
Nup43P59235 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Nup43P59235 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Nup43P59235 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nup43P59235 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Nup43P59235 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Nup43P59235 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC13.51□□□□□ -0.25
Nup43P59235 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nup43P59235 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nup43P59235 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Nup43P59235 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nup43P59235 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Nup43P59235 AC154767.3-201ENSMUST00000225150 1342 ntBASIC13.51□□□□□ -0.25
Nup43P59235 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Nup43P59235 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC13.51□□□□□ -0.25
Nup43P59235 AC149588.3-201ENSMUST00000227515 150 ntBASIC13.51□□□□□ -0.25
Nup43P59235 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nup43P59235 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Nup43P59235 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Nup43P59235 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Nup43P59235 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Nup43P59235 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Nup43P59235 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC13.51□□□□□ -0.25
Nup43P59235 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nup43P59235 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nup43P59235 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nup43P59235 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nup43P59235 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC13.51□□□□□ -0.25
Nup43P59235 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC13.51□□□□□ -0.25
Nup43P59235 Gm45630-201ENSMUST00000210243 1911 ntBASIC13.51□□□□□ -0.25
Nup43P59235 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Nup43P59235 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nup43P59235 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Nup43P59235 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nup43P59235 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nup43P59235 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nup43P59235 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nup43P59235 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nup43P59235 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nup43P59235 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nup43P59235 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nup43P59235 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Nup43P59235 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Nup43P59235 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC13.5□□□□□ -0.25
Nup43P59235 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nup43P59235 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Nup43P59235 Gm27631-201ENSMUST00000184163 466 ntBASIC13.5□□□□□ -0.25
Nup43P59235 AC090659.2-201ENSMUST00000225378 1186 ntBASIC13.5□□□□□ -0.25
Nup43P59235 AC102291.3-201ENSMUST00000226566 405 ntBASIC13.5□□□□□ -0.25
Nup43P59235 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Nup43P59235 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Nup43P59235 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nup43P59235 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nup43P59235 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Nup43P59235 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nup43P59235 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Nup43P59235 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nup43P59235 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Nup43P59235 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Nup43P59235 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nup43P59235 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Nup43P59235 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Nup43P59235 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nup43P59235 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 74.3 ms