Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Gm9856-201ENSMUST00000217077 2578 ntBASIC13.74□□□□□ -0.21
Sox3P53784 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox3P53784 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox3P53784 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox3P53784 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox3P53784 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox3P53784 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox3P53784 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox3P53784 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox3P53784 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox3P53784 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Sox3P53784 AC148324.1-201ENSMUST00000219034 4240 ntBASIC13.73□□□□□ -0.21
Sox3P53784 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox3P53784 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Sox3P53784 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Sox3P53784 Gm8515-201ENSMUST00000194852 576 ntBASIC13.73□□□□□ -0.21
Sox3P53784 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox3P53784 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Sox3P53784 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox3P53784 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox3P53784 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Sox3P53784 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox3P53784 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Sox3P53784 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Sox3P53784 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Sox3P53784 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Sox3P53784 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC13.73□□□□□ -0.21
Sox3P53784 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox3P53784 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox3P53784 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox3P53784 Gm43399-201ENSMUST00000202546 2374 ntBASIC13.73□□□□□ -0.21
Sox3P53784 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Sox3P53784 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Sox3P53784 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox3P53784 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox3P53784 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox3P53784 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC13.73□□□□□ -0.21
Sox3P53784 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Sox3P53784 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Sox3P53784 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox3P53784 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Sox3P53784 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC13.72□□□□□ -0.21
Sox3P53784 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox3P53784 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC13.72□□□□□ -0.21
Sox3P53784 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox3P53784 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox3P53784 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox3P53784 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox3P53784 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox3P53784 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox3P53784 Gm11543-201ENSMUST00000120758 370 ntBASIC13.72□□□□□ -0.21
Sox3P53784 Gm23984-201ENSMUST00000157139 203 ntBASIC13.72□□□□□ -0.21
Sox3P53784 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC13.72□□□□□ -0.21
Sox3P53784 Gm24694-201ENSMUST00000180054 110 ntBASIC13.72□□□□□ -0.21
Sox3P53784 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Sox3P53784 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Sox3P53784 Gm27663-201ENSMUST00000184839 110 ntBASIC13.72□□□□□ -0.21
Sox3P53784 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC13.72□□□□□ -0.21
Sox3P53784 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Sox3P53784 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox3P53784 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC13.72□□□□□ -0.21
Sox3P53784 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox3P53784 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Sox3P53784 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox3P53784 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
Sox3P53784 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox3P53784 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox3P53784 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox3P53784 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC13.72□□□□□ -0.21
Sox3P53784 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox3P53784 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox3P53784 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox3P53784 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox3P53784 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Sox3P53784 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Sox3P53784 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox3P53784 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox3P53784 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox3P53784 Gm21451-201ENSMUST00000111062 2775 ntBASIC13.71□□□□□ -0.21
Sox3P53784 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sox3P53784 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sox3P53784 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Sox3P53784 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Sox3P53784 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sox3P53784 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sox3P53784 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sox3P53784 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sox3P53784 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sox3P53784 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sox3P53784 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sox3P53784 Gm43205-201ENSMUST00000198622 1968 ntBASIC13.71□□□□□ -0.21
Sox3P53784 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Sox3P53784 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sox3P53784 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sox3P53784 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sox3P53784 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC13.71□□□□□ -0.21
Sox3P53784 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Sox3P53784 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC13.71□□□□□ -0.21
Sox3P53784 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Sox3P53784 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms