Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cux1P53564 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cux1P53564 Trav4d-2-201ENSMUST00000120914 335 ntBASIC21.65■■□□□ 1.06
Cux1P53564 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Cux1P53564 Gm2445-201ENSMUST00000182798 989 ntBASIC21.65■■□□□ 1.06
Cux1P53564 Gm37411-201ENSMUST00000194180 2282 ntBASIC21.65■■□□□ 1.06
Cux1P53564 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cux1P53564 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cux1P53564 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Cux1P53564 Gm8213-201ENSMUST00000118191 441 ntBASIC21.65■■□□□ 1.06
Cux1P53564 Gm5687-201ENSMUST00000118252 640 ntBASIC21.65■■□□□ 1.06
Cux1P53564 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC21.65■■□□□ 1.06
Cux1P53564 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
Cux1P53564 Gm5161-201ENSMUST00000075243 853 ntBASIC21.65■■□□□ 1.06
Cux1P53564 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Cux1P53564 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Cux1P53564 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Cux1P53564 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Cux1P53564 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Cux1P53564 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC21.64■■□□□ 1.06
Cux1P53564 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Cux1P53564 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC21.64■■□□□ 1.05
Cux1P53564 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Cux1P53564 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Cux1P53564 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
Cux1P53564 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Cux1P53564 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
Cux1P53564 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC21.64■■□□□ 1.05
Cux1P53564 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Cux1P53564 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Cux1P53564 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC21.64■■□□□ 1.05
Cux1P53564 AC159896.2-201ENSMUST00000214753 269 ntBASIC21.64■■□□□ 1.05
Cux1P53564 AC154319.1-201ENSMUST00000216330 312 ntBASIC21.64■■□□□ 1.05
Cux1P53564 AL589735.1-201ENSMUST00000224353 270 ntBASIC21.64■■□□□ 1.05
Cux1P53564 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Cux1P53564 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
Cux1P53564 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Cux1P53564 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC21.64■■□□□ 1.05
Cux1P53564 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Cux1P53564 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cux1P53564 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Cux1P53564 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cux1P53564 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cux1P53564 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Cux1P53564 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC21.63■■□□□ 1.05
Cux1P53564 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC21.63■■□□□ 1.05
Cux1P53564 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Cux1P53564 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC21.63■■□□□ 1.05
Cux1P53564 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cux1P53564 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cux1P53564 Gm4271-201ENSMUST00000174444 973 ntBASIC21.63■■□□□ 1.05
Cux1P53564 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC21.63■■□□□ 1.05
Cux1P53564 Gm8565-201ENSMUST00000183259 1014 ntBASIC21.63■■□□□ 1.05
Cux1P53564 Gm29705-201ENSMUST00000212598 474 ntBASIC21.63■■□□□ 1.05
Cux1P53564 CU024892.2-201ENSMUST00000224608 832 ntBASIC21.63■■□□□ 1.05
Cux1P53564 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cux1P53564 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cux1P53564 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cux1P53564 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cux1P53564 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC21.63■■□□□ 1.05
Cux1P53564 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cux1P53564 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC21.62■■□□□ 1.05
Cux1P53564 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cux1P53564 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC21.62■■□□□ 1.05
Cux1P53564 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cux1P53564 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cux1P53564 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cux1P53564 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cux1P53564 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Cux1P53564 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cux1P53564 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC21.62■■□□□ 1.05
Cux1P53564 Gm27682-201ENSMUST00000183930 110 ntBASIC21.62■■□□□ 1.05
Cux1P53564 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC21.62■■□□□ 1.05
Cux1P53564 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cux1P53564 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cux1P53564 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Cux1P53564 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cux1P53564 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Cux1P53564 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC21.62■■□□□ 1.05
Cux1P53564 Gm13730-201ENSMUST00000121036 1462 ntBASIC21.62■■□□□ 1.05
Cux1P53564 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Cux1P53564 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cux1P53564 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cux1P53564 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Cux1P53564 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC21.61■■□□□ 1.05
Cux1P53564 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Cux1P53564 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC21.61■■□□□ 1.05
Cux1P53564 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Cux1P53564 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Cux1P53564 Gm24447-201ENSMUST00000083977 338 ntBASIC21.61■■□□□ 1.05
Cux1P53564 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Cux1P53564 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cux1P53564 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cux1P53564 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Cux1P53564 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cux1P53564 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cux1P53564 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Cux1P53564 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Cux1P53564 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cux1P53564 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms