Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sox2P48432 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sox2P48432 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Sox2P48432 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Sox2P48432 Gm18856-201ENSMUST00000178096 1374 ntBASIC13.44□□□□□ -0.26
Sox2P48432 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sox2P48432 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sox2P48432 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox2P48432 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC13.43□□□□□ -0.26
Sox2P48432 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Sox2P48432 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox2P48432 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Sox2P48432 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox2P48432 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox2P48432 Gm38102-201ENSMUST00000192791 1935 ntBASIC13.43□□□□□ -0.26
Sox2P48432 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox2P48432 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox2P48432 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Sox2P48432 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox2P48432 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox2P48432 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox2P48432 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Sox2P48432 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC13.43□□□□□ -0.26
Sox2P48432 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Sox2P48432 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Sox2P48432 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC13.43□□□□□ -0.26
Sox2P48432 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox2P48432 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox2P48432 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox2P48432 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox2P48432 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox2P48432 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC13.43□□□□□ -0.26
Sox2P48432 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox2P48432 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox2P48432 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sox2P48432 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox2P48432 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox2P48432 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Sox2P48432 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Sox2P48432 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox2P48432 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox2P48432 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox2P48432 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox2P48432 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
Sox2P48432 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Sox2P48432 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox2P48432 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Sox2P48432 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox2P48432 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox2P48432 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Sox2P48432 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox2P48432 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC13.42□□□□□ -0.26
Sox2P48432 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC13.42□□□□□ -0.26
Sox2P48432 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Sox2P48432 Gm6550-201ENSMUST00000187574 993 ntBASIC13.42□□□□□ -0.26
Sox2P48432 Gm43347-201ENSMUST00000200226 580 ntBASIC13.42□□□□□ -0.26
Sox2P48432 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Sox2P48432 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox2P48432 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox2P48432 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox2P48432 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox2P48432 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox2P48432 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Sox2P48432 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox2P48432 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Sox2P48432 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox2P48432 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox2P48432 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox2P48432 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sox2P48432 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Sox2P48432 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox2P48432 Gm8096-201ENSMUST00000209921 1591 ntBASIC13.41□□□□□ -0.26
Sox2P48432 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox2P48432 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox2P48432 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox2P48432 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Sox2P48432 Il17rd-203ENSMUST00000225146 3366 ntBASIC13.41□□□□□ -0.26
Sox2P48432 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC13.41□□□□□ -0.26
Sox2P48432 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox2P48432 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Sox2P48432 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox2P48432 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Sox2P48432 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Sox2P48432 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox2P48432 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Sox2P48432 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox2P48432 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Sox2P48432 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Sox2P48432 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC13.41□□□□□ -0.26
Sox2P48432 Gm8597-201ENSMUST00000191525 1109 ntBASIC13.41□□□□□ -0.26
Sox2P48432 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Sox2P48432 AC158538.1-201ENSMUST00000225870 294 ntBASIC13.41□□□□□ -0.26
Sox2P48432 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox2P48432 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox2P48432 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Sox2P48432 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox2P48432 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Sox2P48432 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox2P48432 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sox2P48432 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms