Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Vps4bP46467 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC14.53□□□□□ -0.08
Vps4bP46467 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Vps4bP46467 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vps4bP46467 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vps4bP46467 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vps4bP46467 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Vps4bP46467 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Vps4bP46467 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Vps4bP46467 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Vps4bP46467 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Vps4bP46467 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Vps4bP46467 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Vps4bP46467 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Vps4bP46467 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Vps4bP46467 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Vps4bP46467 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Vps4bP46467 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC14.52□□□□□ -0.08
Vps4bP46467 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Vps4bP46467 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Vps4bP46467 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Vps4bP46467 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Vps4bP46467 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Vps4bP46467 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC14.52□□□□□ -0.09
Vps4bP46467 Gm14057-201ENSMUST00000120631 482 ntBASIC14.52□□□□□ -0.09
Vps4bP46467 Auts2-212ENSMUST00000178555 309 ntBASIC14.52□□□□□ -0.09
Vps4bP46467 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC14.52□□□□□ -0.09
Vps4bP46467 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Vps4bP46467 Gm7229-201ENSMUST00000214719 1007 ntBASIC14.52□□□□□ -0.09
Vps4bP46467 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Vps4bP46467 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Vps4bP46467 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Vps4bP46467 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Vps4bP46467 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Vps4bP46467 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Vps4bP46467 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Vps4bP46467 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Vps4bP46467 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vps4bP46467 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vps4bP46467 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Vps4bP46467 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vps4bP46467 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vps4bP46467 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vps4bP46467 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vps4bP46467 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Vps4bP46467 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vps4bP46467 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vps4bP46467 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Vps4bP46467 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC14.51□□□□□ -0.09
Vps4bP46467 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vps4bP46467 CT025555.1-201ENSMUST00000225901 1217 ntBASIC14.51□□□□□ -0.09
Vps4bP46467 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vps4bP46467 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Vps4bP46467 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
Vps4bP46467 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Vps4bP46467 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Vps4bP46467 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vps4bP46467 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Vps4bP46467 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vps4bP46467 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vps4bP46467 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Vps4bP46467 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vps4bP46467 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vps4bP46467 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vps4bP46467 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Vps4bP46467 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vps4bP46467 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vps4bP46467 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vps4bP46467 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Vps4bP46467 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
Vps4bP46467 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vps4bP46467 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vps4bP46467 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vps4bP46467 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vps4bP46467 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vps4bP46467 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Vps4bP46467 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vps4bP46467 Gm15920-201ENSMUST00000118998 402 ntBASIC14.5□□□□□ -0.09
Vps4bP46467 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC14.5□□□□□ -0.09
Vps4bP46467 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Vps4bP46467 Gm17968-201ENSMUST00000194902 784 ntBASIC14.5□□□□□ -0.09
Vps4bP46467 AC151286.1-201ENSMUST00000198489 145 ntBASIC14.5□□□□□ -0.09
Vps4bP46467 AC102291.3-201ENSMUST00000226566 405 ntBASIC14.5□□□□□ -0.09
Vps4bP46467 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Vps4bP46467 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vps4bP46467 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Vps4bP46467 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vps4bP46467 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vps4bP46467 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vps4bP46467 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vps4bP46467 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vps4bP46467 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC14.5□□□□□ -0.09
Vps4bP46467 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vps4bP46467 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC14.5□□□□□ -0.09
Vps4bP46467 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Vps4bP46467 AC166574.6-201ENSMUST00000227889 1806 ntBASIC14.5□□□□□ -0.09
Vps4bP46467 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vps4bP46467 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Vps4bP46467 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vps4bP46467 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms