Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 CT009713.10-202ENSMUST00000225734 696 ntBASIC13.73□□□□□ -0.21
Sox18P43680 AC154846.1-201ENSMUST00000226278 862 ntBASIC13.73□□□□□ -0.21
Sox18P43680 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Sox18P43680 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox18P43680 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox18P43680 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox18P43680 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC13.73□□□□□ -0.21
Sox18P43680 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Sox18P43680 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC13.73□□□□□ -0.21
Sox18P43680 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox18P43680 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox18P43680 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Sox18P43680 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox18P43680 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox18P43680 Tfap2a-203ENSMUST00000223869 2037 ntBASIC13.73□□□□□ -0.21
Sox18P43680 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox18P43680 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox18P43680 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox18P43680 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC13.72□□□□□ -0.21
Sox18P43680 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox18P43680 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
Sox18P43680 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Sox18P43680 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Sox18P43680 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox18P43680 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox18P43680 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Sox18P43680 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC13.72□□□□□ -0.21
Sox18P43680 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox18P43680 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox18P43680 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Sox18P43680 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox18P43680 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Sox18P43680 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox18P43680 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
Sox18P43680 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox18P43680 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox18P43680 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Sox18P43680 Gm12585-201ENSMUST00000117307 290 ntBASIC13.72□□□□□ -0.21
Sox18P43680 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC13.72□□□□□ -0.21
Sox18P43680 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC13.72□□□□□ -0.21
Sox18P43680 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC13.72□□□□□ -0.21
Sox18P43680 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Sox18P43680 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC13.72□□□□□ -0.21
Sox18P43680 AA619741-201ENSMUST00000195095 646 ntBASIC13.72□□□□□ -0.21
Sox18P43680 Gm45098-201ENSMUST00000207179 657 ntBASIC13.72□□□□□ -0.21
Sox18P43680 Gm7067-201ENSMUST00000207698 1249 ntBASIC13.72□□□□□ -0.21
Sox18P43680 AC121804.3-201ENSMUST00000223420 295 ntBASIC13.72□□□□□ -0.21
Sox18P43680 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox18P43680 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox18P43680 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox18P43680 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Sox18P43680 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Sox18P43680 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox18P43680 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Sox18P43680 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox18P43680 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox18P43680 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox18P43680 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC13.72□□□□□ -0.21
Sox18P43680 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
Sox18P43680 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox18P43680 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Sox18P43680 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Sox18P43680 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Sox18P43680 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Sox18P43680 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sox18P43680 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC13.71□□□□□ -0.21
Sox18P43680 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Sox18P43680 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Sox18P43680 Gm14660-201ENSMUST00000119809 575 ntBASIC13.71□□□□□ -0.21
Sox18P43680 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC13.71□□□□□ -0.21
Sox18P43680 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Sox18P43680 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Sox18P43680 AC140451.2-201ENSMUST00000228030 664 ntBASIC13.71□□□□□ -0.21
Sox18P43680 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sox18P43680 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sox18P43680 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sox18P43680 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sox18P43680 Olfr1212-201ENSMUST00000055895 936 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Sox18P43680 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sox18P43680 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Sox18P43680 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sox18P43680 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Sox18P43680 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sox18P43680 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sox18P43680 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sox18P43680 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Sox18P43680 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Sox18P43680 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Sox18P43680 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.22
Sox18P43680 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Sox18P43680 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC13.71□□□□□ -0.22
Sox18P43680 Gm11839-201ENSMUST00000120647 1953 ntBASIC13.71□□□□□ -0.22
Sox18P43680 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sox18P43680 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Sox18P43680 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC13.7□□□□□ -0.22
Sox18P43680 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sox18P43680 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sox18P43680 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sox18P43680 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sox18P43680 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC13.7□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms