Protein–RNA interactions for Protein: P43247

Msh2, DNA mismatch repair protein Msh2, mousemouse

Known RBP Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh2P43247 Gm10175-201ENSMUST00000086013 645 ntBASIC14.75□□□□□ -0.05
Msh2P43247 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Msh2P43247 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC14.75□□□□□ -0.05
Msh2P43247 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Msh2P43247 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Msh2P43247 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Msh2P43247 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Msh2P43247 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Msh2P43247 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
Msh2P43247 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Msh2P43247 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Msh2P43247 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Msh2P43247 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Msh2P43247 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Msh2P43247 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Msh2P43247 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
Msh2P43247 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC14.74□□□□□ -0.05
Msh2P43247 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC14.74□□□□□ -0.05
Msh2P43247 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC14.74□□□□□ -0.05
Msh2P43247 Gm2272-201ENSMUST00000194903 582 ntBASIC14.74□□□□□ -0.05
Msh2P43247 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Msh2P43247 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Msh2P43247 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Msh2P43247 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC14.74□□□□□ -0.05
Msh2P43247 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
Msh2P43247 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Msh2P43247 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Msh2P43247 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Msh2P43247 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Msh2P43247 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Msh2P43247 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Msh2P43247 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC14.74□□□□□ -0.05
Msh2P43247 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Msh2P43247 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Msh2P43247 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Msh2P43247 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Msh2P43247 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Msh2P43247 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Msh2P43247 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Msh2P43247 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Msh2P43247 Gm5639-201ENSMUST00000122305 2403 ntBASIC14.73□□□□□ -0.05
Msh2P43247 Gm38346-201ENSMUST00000192379 2639 ntBASIC14.73□□□□□ -0.05
Msh2P43247 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Msh2P43247 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Msh2P43247 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Msh2P43247 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC14.73□□□□□ -0.05
Msh2P43247 Trav13-3-201ENSMUST00000117226 336 ntBASIC14.73□□□□□ -0.05
Msh2P43247 Gm16198-201ENSMUST00000118766 670 ntBASIC14.73□□□□□ -0.05
Msh2P43247 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Msh2P43247 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Msh2P43247 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Msh2P43247 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Msh2P43247 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Msh2P43247 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Msh2P43247 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Msh2P43247 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Msh2P43247 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Msh2P43247 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Msh2P43247 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Msh2P43247 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Msh2P43247 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC14.73□□□□□ -0.05
Msh2P43247 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Msh2P43247 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Msh2P43247 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Msh2P43247 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Msh2P43247 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Msh2P43247 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC14.73□□□□□ -0.05
Msh2P43247 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Msh2P43247 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Msh2P43247 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Msh2P43247 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Msh2P43247 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Msh2P43247 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Msh2P43247 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Msh2P43247 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Msh2P43247 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Msh2P43247 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Msh2P43247 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Msh2P43247 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC14.72□□□□□ -0.05
Msh2P43247 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Msh2P43247 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Msh2P43247 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Msh2P43247 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Msh2P43247 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Msh2P43247 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Msh2P43247 AC121801.1-201ENSMUST00000225363 1899 ntBASIC14.72□□□□□ -0.05
Msh2P43247 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Msh2P43247 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.72□□□□□ -0.05
Msh2P43247 Gm38094-201ENSMUST00000195864 2978 ntBASIC14.72□□□□□ -0.05
Msh2P43247 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Msh2P43247 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Msh2P43247 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Msh2P43247 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Msh2P43247 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Msh2P43247 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC14.72□□□□□ -0.05
Msh2P43247 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Msh2P43247 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC14.72□□□□□ -0.05
Msh2P43247 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Msh2P43247 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC14.72□□□□□ -0.05
Msh2P43247 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC14.72□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms