Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Abca1P41233 Gm5320-201ENSMUST00000207163 1519 ntBASIC11.93□□□□□ -0.5
Abca1P41233 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC11.92□□□□□ -0.5
Abca1P41233 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Abca1P41233 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Abca1P41233 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Abca1P41233 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Abca1P41233 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Abca1P41233 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Abca1P41233 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC11.92□□□□□ -0.5
Abca1P41233 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Abca1P41233 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Abca1P41233 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC11.92□□□□□ -0.5
Abca1P41233 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
Abca1P41233 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Abca1P41233 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Abca1P41233 Gm14042-201ENSMUST00000120139 833 ntBASIC11.92□□□□□ -0.5
Abca1P41233 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC11.92□□□□□ -0.5
Abca1P41233 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Abca1P41233 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Abca1P41233 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Abca1P41233 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Abca1P41233 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Abca1P41233 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Abca1P41233 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC11.92□□□□□ -0.5
Abca1P41233 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC11.92□□□□□ -0.5
Abca1P41233 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Abca1P41233 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Abca1P41233 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC11.92□□□□□ -0.5
Abca1P41233 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Abca1P41233 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Abca1P41233 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Abca1P41233 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Abca1P41233 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Abca1P41233 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Abca1P41233 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Abca1P41233 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
Abca1P41233 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Abca1P41233 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC11.91□□□□□ -0.5
Abca1P41233 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Abca1P41233 Dupd1-202ENSMUST00000224735 548 ntBASIC11.91□□□□□ -0.5
Abca1P41233 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC11.91□□□□□ -0.5
Abca1P41233 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Abca1P41233 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Abca1P41233 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Abca1P41233 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Abca1P41233 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Abca1P41233 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Abca1P41233 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Abca1P41233 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Abca1P41233 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Abca1P41233 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC11.91□□□□□ -0.5
Abca1P41233 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Abca1P41233 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC11.91□□□□□ -0.5
Abca1P41233 Gm9768-201ENSMUST00000206007 2861 ntBASIC11.91□□□□□ -0.5
Abca1P41233 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Abca1P41233 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
Abca1P41233 Gm3436-201ENSMUST00000179930 840 ntBASIC11.91□□□□□ -0.5
Abca1P41233 Gm6745-201ENSMUST00000199216 526 ntBASIC11.91□□□□□ -0.5
Abca1P41233 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Abca1P41233 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC11.91□□□□□ -0.5
Abca1P41233 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Abca1P41233 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Abca1P41233 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Abca1P41233 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Abca1P41233 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Abca1P41233 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Abca1P41233 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Abca1P41233 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Abca1P41233 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Abca1P41233 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Abca1P41233 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Abca1P41233 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC11.91□□□□□ -0.5
Abca1P41233 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Abca1P41233 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Abca1P41233 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Abca1P41233 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Abca1P41233 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Abca1P41233 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC11.9□□□□□ -0.5
Abca1P41233 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC11.9□□□□□ -0.5
Abca1P41233 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Abca1P41233 Gm7556-201ENSMUST00000201178 1084 ntBASIC11.9□□□□□ -0.5
Abca1P41233 Gm45668-201ENSMUST00000211271 493 ntBASIC11.9□□□□□ -0.5
Abca1P41233 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Abca1P41233 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Abca1P41233 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Abca1P41233 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Abca1P41233 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC11.9□□□□□ -0.5
Abca1P41233 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Abca1P41233 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Abca1P41233 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Abca1P41233 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Abca1P41233 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC11.9□□□□□ -0.5
Abca1P41233 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Abca1P41233 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Abca1P41233 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Abca1P41233 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Abca1P41233 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Abca1P41233 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
Abca1P41233 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms