Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
Cxcl12P40224 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC14.62□□□□□ -0.07
Cxcl12P40224 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cxcl12P40224 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cxcl12P40224 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Cxcl12P40224 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC14.62□□□□□ -0.07
Cxcl12P40224 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cxcl12P40224 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cxcl12P40224 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cxcl12P40224 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Cxcl12P40224 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC14.62□□□□□ -0.07
Cxcl12P40224 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Cxcl12P40224 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC14.62□□□□□ -0.07
Cxcl12P40224 Gm24420-201ENSMUST00000176676 59 ntBASIC14.62□□□□□ -0.07
Cxcl12P40224 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cxcl12P40224 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC14.62□□□□□ -0.07
Cxcl12P40224 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC14.62□□□□□ -0.07
Cxcl12P40224 Gm44608-201ENSMUST00000206827 855 ntBASIC14.62□□□□□ -0.07
Cxcl12P40224 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC14.62□□□□□ -0.07
Cxcl12P40224 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Cxcl12P40224 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Cxcl12P40224 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cxcl12P40224 Ankra2-208ENSMUST00000226100 1476 ntBASIC14.62□□□□□ -0.07
Cxcl12P40224 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cxcl12P40224 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cxcl12P40224 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
Cxcl12P40224 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
Cxcl12P40224 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Cxcl12P40224 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cxcl12P40224 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cxcl12P40224 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cxcl12P40224 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Cxcl12P40224 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cxcl12P40224 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cxcl12P40224 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cxcl12P40224 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cxcl12P40224 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cxcl12P40224 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Cxcl12P40224 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cxcl12P40224 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Cxcl12P40224 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC14.61□□□□□ -0.07
Cxcl12P40224 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Cxcl12P40224 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Cxcl12P40224 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC14.61□□□□□ -0.07
Cxcl12P40224 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cxcl12P40224 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cxcl12P40224 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cxcl12P40224 Gm27501-201ENSMUST00000183599 107 ntBASIC14.61□□□□□ -0.07
Cxcl12P40224 Gm29199-201ENSMUST00000187766 775 ntBASIC14.61□□□□□ -0.07
Cxcl12P40224 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC14.61□□□□□ -0.07
Cxcl12P40224 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Cxcl12P40224 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC14.61□□□□□ -0.07
Cxcl12P40224 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cxcl12P40224 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cxcl12P40224 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cxcl12P40224 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Cxcl12P40224 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Cxcl12P40224 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cxcl12P40224 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cxcl12P40224 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cxcl12P40224 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cxcl12P40224 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
Cxcl12P40224 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cxcl12P40224 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cxcl12P40224 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cxcl12P40224 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cxcl12P40224 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cxcl12P40224 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC14.6□□□□□ -0.07
Cxcl12P40224 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Cxcl12P40224 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cxcl12P40224 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC14.6□□□□□ -0.07
Cxcl12P40224 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cxcl12P40224 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Cxcl12P40224 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cxcl12P40224 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cxcl12P40224 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Cxcl12P40224 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cxcl12P40224 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cxcl12P40224 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
Cxcl12P40224 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cxcl12P40224 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cxcl12P40224 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Cxcl12P40224 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cxcl12P40224 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cxcl12P40224 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cxcl12P40224 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Cxcl12P40224 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC14.6□□□□□ -0.07
Cxcl12P40224 Gm11803-201ENSMUST00000119966 444 ntBASIC14.6□□□□□ -0.07
Cxcl12P40224 Gm11557-201ENSMUST00000120200 1008 ntBASIC14.6□□□□□ -0.07
Cxcl12P40224 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cxcl12P40224 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Cxcl12P40224 Gm8927-201ENSMUST00000181978 981 ntBASIC14.6□□□□□ -0.07
Cxcl12P40224 Gm38002-201ENSMUST00000193255 180 ntBASIC14.6□□□□□ -0.07
Cxcl12P40224 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cxcl12P40224 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
Cxcl12P40224 Gm3222-201ENSMUST00000071282 990 ntBASIC14.6□□□□□ -0.07
Cxcl12P40224 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cxcl12P40224 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cxcl12P40224 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cxcl12P40224 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms