Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Upk2P38575 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Upk2P38575 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC12.56□□□□□ -0.4
Upk2P38575 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Upk2P38575 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Upk2P38575 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Upk2P38575 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Upk2P38575 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Upk2P38575 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Upk2P38575 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Upk2P38575 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC12.56□□□□□ -0.4
Upk2P38575 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Upk2P38575 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Upk2P38575 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Upk2P38575 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Upk2P38575 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Upk2P38575 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC12.56□□□□□ -0.4
Upk2P38575 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
Upk2P38575 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Upk2P38575 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Upk2P38575 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Upk2P38575 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Upk2P38575 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC12.55□□□□□ -0.4
Upk2P38575 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Upk2P38575 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Upk2P38575 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Upk2P38575 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Upk2P38575 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Upk2P38575 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC12.55□□□□□ -0.4
Upk2P38575 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Upk2P38575 Gm38102-201ENSMUST00000192791 1935 ntBASIC12.55□□□□□ -0.4
Upk2P38575 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC12.55□□□□□ -0.4
Upk2P38575 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Upk2P38575 Gm25287-201ENSMUST00000103846 110 ntBASIC12.55□□□□□ -0.4
Upk2P38575 Gm22918-201ENSMUST00000103855 110 ntBASIC12.55□□□□□ -0.4
Upk2P38575 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC12.55□□□□□ -0.4
Upk2P38575 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC12.55□□□□□ -0.4
Upk2P38575 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC12.55□□□□□ -0.4
Upk2P38575 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Upk2P38575 Mir6990-201ENSMUST00000183724 91 ntBASIC12.55□□□□□ -0.4
Upk2P38575 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC12.55□□□□□ -0.4
Upk2P38575 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Upk2P38575 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Upk2P38575 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Upk2P38575 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC12.55□□□□□ -0.4
Upk2P38575 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC12.55□□□□□ -0.4
Upk2P38575 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Upk2P38575 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Upk2P38575 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Upk2P38575 Gm5648-201ENSMUST00000122244 1587 ntBASIC12.55□□□□□ -0.4
Upk2P38575 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Upk2P38575 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Upk2P38575 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Upk2P38575 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Upk2P38575 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Upk2P38575 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Upk2P38575 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Upk2P38575 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Upk2P38575 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Upk2P38575 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Upk2P38575 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Upk2P38575 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Upk2P38575 Gm9109-201ENSMUST00000120254 1405 ntBASIC12.54□□□□□ -0.4
Upk2P38575 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Upk2P38575 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Upk2P38575 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Upk2P38575 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Upk2P38575 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Upk2P38575 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Upk2P38575 CT025626.1-201ENSMUST00000223735 1455 ntBASIC12.54□□□□□ -0.4
Upk2P38575 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Upk2P38575 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Upk2P38575 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Upk2P38575 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Upk2P38575 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Upk2P38575 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC12.54□□□□□ -0.4
Upk2P38575 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Upk2P38575 Gm8584-201ENSMUST00000171982 758 ntBASIC12.54□□□□□ -0.4
Upk2P38575 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC12.54□□□□□ -0.4
Upk2P38575 Gm24513-201ENSMUST00000174964 138 ntBASIC12.54□□□□□ -0.4
Upk2P38575 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC12.54□□□□□ -0.4
Upk2P38575 Gm18049-201ENSMUST00000208909 581 ntBASIC12.54□□□□□ -0.4
Upk2P38575 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Upk2P38575 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Upk2P38575 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Upk2P38575 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Upk2P38575 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Upk2P38575 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Upk2P38575 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Upk2P38575 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Upk2P38575 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Upk2P38575 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Upk2P38575 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Upk2P38575 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Upk2P38575 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Upk2P38575 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Upk2P38575 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Upk2P38575 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Upk2P38575 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Upk2P38575 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms