Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LdlrP35951 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LdlrP35951 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LdlrP35951 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC14.25□□□□□ -0.13
LdlrP35951 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LdlrP35951 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LdlrP35951 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LdlrP35951 Gm37411-201ENSMUST00000194180 2282 ntBASIC14.25□□□□□ -0.13
LdlrP35951 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC14.25□□□□□ -0.13
LdlrP35951 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
LdlrP35951 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
LdlrP35951 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LdlrP35951 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LdlrP35951 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
LdlrP35951 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LdlrP35951 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
LdlrP35951 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LdlrP35951 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
LdlrP35951 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LdlrP35951 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LdlrP35951 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
LdlrP35951 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
LdlrP35951 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC14.24□□□□□ -0.13
LdlrP35951 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
LdlrP35951 Gm5366-201ENSMUST00000215494 1338 ntBASIC14.24□□□□□ -0.13
LdlrP35951 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LdlrP35951 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
LdlrP35951 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LdlrP35951 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LdlrP35951 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LdlrP35951 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC14.24□□□□□ -0.13
LdlrP35951 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LdlrP35951 AC139382.1-201ENSMUST00000221402 498 ntBASIC14.24□□□□□ -0.13
LdlrP35951 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LdlrP35951 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
LdlrP35951 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC14.24□□□□□ -0.13
LdlrP35951 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LdlrP35951 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LdlrP35951 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LdlrP35951 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LdlrP35951 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
LdlrP35951 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LdlrP35951 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
LdlrP35951 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LdlrP35951 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC14.24□□□□□ -0.13
LdlrP35951 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC14.24□□□□□ -0.13
LdlrP35951 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
LdlrP35951 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LdlrP35951 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LdlrP35951 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LdlrP35951 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC14.24□□□□□ -0.13
LdlrP35951 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LdlrP35951 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
LdlrP35951 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
LdlrP35951 Matn2-206ENSMUST00000228570 2798 ntBASIC14.23□□□□□ -0.13
LdlrP35951 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LdlrP35951 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LdlrP35951 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
LdlrP35951 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
LdlrP35951 Gm13294-201ENSMUST00000121757 1330 ntBASIC14.23□□□□□ -0.13
LdlrP35951 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
LdlrP35951 Gm13616-201ENSMUST00000120600 222 ntBASIC14.23□□□□□ -0.13
LdlrP35951 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC14.23□□□□□ -0.13
LdlrP35951 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LdlrP35951 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC14.23□□□□□ -0.13
LdlrP35951 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
LdlrP35951 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
LdlrP35951 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LdlrP35951 Gm44492-201ENSMUST00000197012 141 ntBASIC14.23□□□□□ -0.13
LdlrP35951 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC14.23□□□□□ -0.13
LdlrP35951 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LdlrP35951 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LdlrP35951 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LdlrP35951 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LdlrP35951 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
LdlrP35951 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
LdlrP35951 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LdlrP35951 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LdlrP35951 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
LdlrP35951 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
LdlrP35951 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LdlrP35951 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LdlrP35951 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LdlrP35951 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LdlrP35951 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
LdlrP35951 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LdlrP35951 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LdlrP35951 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
LdlrP35951 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LdlrP35951 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LdlrP35951 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LdlrP35951 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
LdlrP35951 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LdlrP35951 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
LdlrP35951 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
LdlrP35951 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LdlrP35951 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC14.22□□□□□ -0.13
LdlrP35951 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
LdlrP35951 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.22□□□□□ -0.13
LdlrP35951 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms