Protein–RNA interactions for Protein: P34928

Apoc1, Apolipoprotein C-I, mousemouse

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Apoc1P34928 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC12.5□□□□□ -0.41
Apoc1P34928 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Apoc1P34928 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Apoc1P34928 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Apoc1P34928 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Apoc1P34928 Nupl1-207ENSMUST00000225311 2475 ntBASIC12.49□□□□□ -0.41
Apoc1P34928 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Apoc1P34928 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Apoc1P34928 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC12.49□□□□□ -0.41
Apoc1P34928 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Apoc1P34928 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Apoc1P34928 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC12.49□□□□□ -0.41
Apoc1P34928 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Apoc1P34928 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Apoc1P34928 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Apoc1P34928 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Apoc1P34928 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Apoc1P34928 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Apoc1P34928 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC12.49□□□□□ -0.41
Apoc1P34928 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC12.49□□□□□ -0.41
Apoc1P34928 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Apoc1P34928 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC12.49□□□□□ -0.41
Apoc1P34928 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Apoc1P34928 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Apoc1P34928 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC12.49□□□□□ -0.41
Apoc1P34928 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC12.49□□□□□ -0.41
Apoc1P34928 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC12.49□□□□□ -0.41
Apoc1P34928 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Apoc1P34928 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Apoc1P34928 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Apoc1P34928 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC12.49□□□□□ -0.41
Apoc1P34928 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Apoc1P34928 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC12.49□□□□□ -0.41
Apoc1P34928 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
Apoc1P34928 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC12.49□□□□□ -0.41
Apoc1P34928 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Apoc1P34928 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Apoc1P34928 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Apoc1P34928 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Apoc1P34928 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Apoc1P34928 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Apoc1P34928 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Apoc1P34928 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Apoc1P34928 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Apoc1P34928 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Apoc1P34928 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Apoc1P34928 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Apoc1P34928 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Apoc1P34928 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Apoc1P34928 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Apoc1P34928 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Apoc1P34928 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Apoc1P34928 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Apoc1P34928 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Apoc1P34928 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC12.48□□□□□ -0.41
Apoc1P34928 Gm16026-204ENSMUST00000162652 683 ntBASIC12.48□□□□□ -0.41
Apoc1P34928 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Apoc1P34928 Gm27628-201ENSMUST00000184911 107 ntBASIC12.48□□□□□ -0.41
Apoc1P34928 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC12.48□□□□□ -0.41
Apoc1P34928 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC12.48□□□□□ -0.41
Apoc1P34928 AC164629.2-201ENSMUST00000217916 270 ntBASIC12.48□□□□□ -0.41
Apoc1P34928 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC12.48□□□□□ -0.41
Apoc1P34928 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Apoc1P34928 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Apoc1P34928 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Apoc1P34928 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Apoc1P34928 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Apoc1P34928 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Apoc1P34928 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Apoc1P34928 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Apoc1P34928 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Apoc1P34928 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Apoc1P34928 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Apoc1P34928 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Apoc1P34928 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Apoc1P34928 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Apoc1P34928 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Apoc1P34928 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Apoc1P34928 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Apoc1P34928 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Apoc1P34928 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
Apoc1P34928 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Apoc1P34928 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Apoc1P34928 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Apoc1P34928 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Apoc1P34928 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Apoc1P34928 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC12.47□□□□□ -0.41
Apoc1P34928 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12.47□□□□□ -0.41
Apoc1P34928 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Apoc1P34928 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Apoc1P34928 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Apoc1P34928 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Apoc1P34928 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Apoc1P34928 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Apoc1P34928 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Apoc1P34928 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC12.47□□□□□ -0.41
Apoc1P34928 Gm4691-201ENSMUST00000182339 1000 ntBASIC12.47□□□□□ -0.41
Apoc1P34928 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC12.47□□□□□ -0.41
Apoc1P34928 Gm2451-201ENSMUST00000199447 999 ntBASIC12.47□□□□□ -0.41
Apoc1P34928 Gm10290-201ENSMUST00000200451 999 ntBASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms