Protein–RNA interactions for Protein: P30658

Cbx2, Chromobox protein homolog 2, mousemouse

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx2P30658 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cbx2P30658 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cbx2P30658 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Cbx2P30658 Gm16342-201ENSMUST00000124025 1025 ntBASIC16.09■□□□□ 0.17
Cbx2P30658 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC16.09■□□□□ 0.17
Cbx2P30658 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Cbx2P30658 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cbx2P30658 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Cbx2P30658 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC16.09■□□□□ 0.17
Cbx2P30658 Gm24196-201ENSMUST00000179161 110 ntBASIC16.09■□□□□ 0.17
Cbx2P30658 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cbx2P30658 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Cbx2P30658 Gm18054-201ENSMUST00000207539 555 ntBASIC16.09■□□□□ 0.17
Cbx2P30658 Gm18027-201ENSMUST00000218947 619 ntBASIC16.09■□□□□ 0.17
Cbx2P30658 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Cbx2P30658 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cbx2P30658 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cbx2P30658 Gm42632-201ENSMUST00000201707 2411 ntBASIC16.09■□□□□ 0.17
Cbx2P30658 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Cbx2P30658 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC16.09■□□□□ 0.17
Cbx2P30658 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Cbx2P30658 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Cbx2P30658 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cbx2P30658 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC16.09■□□□□ 0.17
Cbx2P30658 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
Cbx2P30658 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cbx2P30658 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cbx2P30658 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cbx2P30658 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Cbx2P30658 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Cbx2P30658 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC16.08■□□□□ 0.17
Cbx2P30658 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Cbx2P30658 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Cbx2P30658 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Cbx2P30658 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cbx2P30658 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cbx2P30658 Gm13612-201ENSMUST00000119276 390 ntBASIC16.08■□□□□ 0.16
Cbx2P30658 Gm13385-201ENSMUST00000121089 220 ntBASIC16.08■□□□□ 0.16
Cbx2P30658 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC16.08■□□□□ 0.16
Cbx2P30658 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC16.08■□□□□ 0.16
Cbx2P30658 Gm24644-201ENSMUST00000157114 139 ntBASIC16.08■□□□□ 0.16
Cbx2P30658 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cbx2P30658 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cbx2P30658 Gm27514-201ENSMUST00000183692 110 ntBASIC16.08■□□□□ 0.16
Cbx2P30658 Gm6983-201ENSMUST00000214912 628 ntBASIC16.08■□□□□ 0.16
Cbx2P30658 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cbx2P30658 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cbx2P30658 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Cbx2P30658 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Cbx2P30658 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Cbx2P30658 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cbx2P30658 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cbx2P30658 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Cbx2P30658 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cbx2P30658 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cbx2P30658 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cbx2P30658 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC16.08■□□□□ 0.16
Cbx2P30658 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cbx2P30658 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cbx2P30658 Gm42471-201ENSMUST00000201457 1865 ntBASIC16.08■□□□□ 0.16
Cbx2P30658 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC16.07■□□□□ 0.16
Cbx2P30658 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cbx2P30658 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cbx2P30658 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cbx2P30658 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cbx2P30658 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cbx2P30658 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Cbx2P30658 Gm11557-201ENSMUST00000120200 1008 ntBASIC16.07■□□□□ 0.16
Cbx2P30658 Gm16177-201ENSMUST00000120728 718 ntBASIC16.07■□□□□ 0.16
Cbx2P30658 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC16.07■□□□□ 0.16
Cbx2P30658 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cbx2P30658 Gm8927-201ENSMUST00000181978 981 ntBASIC16.07■□□□□ 0.16
Cbx2P30658 Gm4959-201ENSMUST00000197271 1044 ntBASIC16.07■□□□□ 0.16
Cbx2P30658 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC16.07■□□□□ 0.16
Cbx2P30658 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC16.07■□□□□ 0.16
Cbx2P30658 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cbx2P30658 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cbx2P30658 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cbx2P30658 Gm3222-201ENSMUST00000071282 990 ntBASIC16.07■□□□□ 0.16
Cbx2P30658 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cbx2P30658 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Cbx2P30658 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC16.07■□□□□ 0.16
Cbx2P30658 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cbx2P30658 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cbx2P30658 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cbx2P30658 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC16.07■□□□□ 0.16
Cbx2P30658 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Cbx2P30658 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cbx2P30658 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cbx2P30658 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cbx2P30658 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Cbx2P30658 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Cbx2P30658 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cbx2P30658 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Cbx2P30658 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC16.06■□□□□ 0.16
Cbx2P30658 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cbx2P30658 Gm7553-201ENSMUST00000185805 1426 ntBASIC16.06■□□□□ 0.16
Cbx2P30658 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cbx2P30658 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC16.06■□□□□ 0.16
Cbx2P30658 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC16.06■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms