Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Gm13559-201ENSMUST00000120476 863 ntBASIC13.22□□□□□ -0.29
Nedd8P29595 Gm6623-201ENSMUST00000173570 544 ntBASIC13.22□□□□□ -0.29
Nedd8P29595 Gm20760-201ENSMUST00000179197 648 ntBASIC13.22□□□□□ -0.29
Nedd8P29595 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC13.22□□□□□ -0.29
Nedd8P29595 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC13.22□□□□□ -0.29
Nedd8P29595 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Nedd8P29595 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nedd8P29595 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nedd8P29595 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nedd8P29595 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Nedd8P29595 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nedd8P29595 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Nedd8P29595 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC13.22□□□□□ -0.29
Nedd8P29595 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC13.22□□□□□ -0.29
Nedd8P29595 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Nedd8P29595 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nedd8P29595 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nedd8P29595 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nedd8P29595 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nedd8P29595 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nedd8P29595 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nedd8P29595 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Nedd8P29595 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.29
Nedd8P29595 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC13.21□□□□□ -0.29
Nedd8P29595 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Nedd8P29595 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Nedd8P29595 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.29
Nedd8P29595 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Nedd8P29595 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nedd8P29595 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nedd8P29595 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Nedd8P29595 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Nedd8P29595 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Nedd8P29595 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nedd8P29595 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC13.21□□□□□ -0.29
Nedd8P29595 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nedd8P29595 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Nedd8P29595 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
Nedd8P29595 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nedd8P29595 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nedd8P29595 AC093926.2-201ENSMUST00000214468 1228 ntBASIC13.21□□□□□ -0.29
Nedd8P29595 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Nedd8P29595 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nedd8P29595 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nedd8P29595 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nedd8P29595 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC13.21□□□□□ -0.29
Nedd8P29595 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC13.21□□□□□ -0.3
Nedd8P29595 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Nedd8P29595 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Nedd8P29595 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Nedd8P29595 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Nedd8P29595 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Nedd8P29595 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Nedd8P29595 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Nedd8P29595 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Nedd8P29595 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Nedd8P29595 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nedd8P29595 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Nedd8P29595 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nedd8P29595 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nedd8P29595 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nedd8P29595 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nedd8P29595 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nedd8P29595 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nedd8P29595 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nedd8P29595 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Nedd8P29595 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nedd8P29595 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC13.2□□□□□ -0.3
Nedd8P29595 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nedd8P29595 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nedd8P29595 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nedd8P29595 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nedd8P29595 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Nedd8P29595 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nedd8P29595 Trav13-3-201ENSMUST00000117226 336 ntBASIC13.2□□□□□ -0.3
Nedd8P29595 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Nedd8P29595 Gm7889-201ENSMUST00000185591 958 ntBASIC13.2□□□□□ -0.3
Nedd8P29595 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC13.2□□□□□ -0.3
Nedd8P29595 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC13.2□□□□□ -0.3
Nedd8P29595 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nedd8P29595 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Nedd8P29595 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nedd8P29595 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Nedd8P29595 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC13.2□□□□□ -0.3
Nedd8P29595 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nedd8P29595 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Nedd8P29595 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Nedd8P29595 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nedd8P29595 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC13.2□□□□□ -0.3
Nedd8P29595 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Nedd8P29595 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nedd8P29595 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nedd8P29595 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Nedd8P29595 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nedd8P29595 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC13.19□□□□□ -0.3
Nedd8P29595 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nedd8P29595 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nedd8P29595 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Nedd8P29595 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC13.19□□□□□ -0.3
Nedd8P29595 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms