Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Cd40lgP27548 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC13.22□□□□□ -0.29
Cd40lgP27548 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cd40lgP27548 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cd40lgP27548 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cd40lgP27548 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Cd40lgP27548 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cd40lgP27548 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cd40lgP27548 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Cd40lgP27548 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Cd40lgP27548 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Cd40lgP27548 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC13.22□□□□□ -0.29
Cd40lgP27548 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Cd40lgP27548 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Cd40lgP27548 AC131710.1-201ENSMUST00000228336 990 ntBASIC13.22□□□□□ -0.29
Cd40lgP27548 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
Cd40lgP27548 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cd40lgP27548 Gm8396-201ENSMUST00000057361 823 ntBASIC13.22□□□□□ -0.29
Cd40lgP27548 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC13.22□□□□□ -0.29
Cd40lgP27548 BC037039-201ENSMUST00000192003 2205 ntBASIC13.22□□□□□ -0.29
Cd40lgP27548 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Cd40lgP27548 Gm45003-201ENSMUST00000205875 2158 ntBASIC13.22□□□□□ -0.29
Cd40lgP27548 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cd40lgP27548 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cd40lgP27548 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cd40lgP27548 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Cd40lgP27548 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Cd40lgP27548 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cd40lgP27548 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cd40lgP27548 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Cd40lgP27548 AC164565.1-201ENSMUST00000217520 1484 ntBASIC13.22□□□□□ -0.29
Cd40lgP27548 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cd40lgP27548 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cd40lgP27548 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cd40lgP27548 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cd40lgP27548 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cd40lgP27548 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cd40lgP27548 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cd40lgP27548 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Cd40lgP27548 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cd40lgP27548 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cd40lgP27548 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Cd40lgP27548 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cd40lgP27548 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cd40lgP27548 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cd40lgP27548 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Cd40lgP27548 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.29
Cd40lgP27548 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cd40lgP27548 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC13.21□□□□□ -0.29
Cd40lgP27548 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Cd40lgP27548 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Cd40lgP27548 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC13.21□□□□□ -0.29
Cd40lgP27548 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Cd40lgP27548 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Cd40lgP27548 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cd40lgP27548 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cd40lgP27548 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Cd40lgP27548 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC13.21□□□□□ -0.29
Cd40lgP27548 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cd40lgP27548 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC13.21□□□□□ -0.3
Cd40lgP27548 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Cd40lgP27548 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cd40lgP27548 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC13.21□□□□□ -0.3
Cd40lgP27548 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cd40lgP27548 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cd40lgP27548 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Cd40lgP27548 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cd40lgP27548 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cd40lgP27548 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC13.2□□□□□ -0.3
Cd40lgP27548 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cd40lgP27548 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Cd40lgP27548 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cd40lgP27548 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cd40lgP27548 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cd40lgP27548 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cd40lgP27548 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cd40lgP27548 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cd40lgP27548 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Cd40lgP27548 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cd40lgP27548 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cd40lgP27548 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cd40lgP27548 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cd40lgP27548 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cd40lgP27548 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC13.2□□□□□ -0.3
Cd40lgP27548 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC13.2□□□□□ -0.3
Cd40lgP27548 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC13.2□□□□□ -0.3
Cd40lgP27548 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Cd40lgP27548 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cd40lgP27548 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC13.2□□□□□ -0.3
Cd40lgP27548 AC140397.2-201ENSMUST00000224213 834 ntBASIC13.2□□□□□ -0.3
Cd40lgP27548 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
Cd40lgP27548 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
Cd40lgP27548 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cd40lgP27548 Gm21009-201ENSMUST00000197169 1669 ntBASIC13.2□□□□□ -0.3
Cd40lgP27548 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cd40lgP27548 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cd40lgP27548 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cd40lgP27548 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cd40lgP27548 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC13.2□□□□□ -0.3
Cd40lgP27548 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms