Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tnfrsf1aP25118 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC12□□□□□ -0.49
Tnfrsf1aP25118 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tnfrsf1aP25118 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Tnfrsf1aP25118 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Tnfrsf1aP25118 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tnfrsf1aP25118 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Tnfrsf1aP25118 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tnfrsf1aP25118 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Tnfrsf1aP25118 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Tnfrsf1aP25118 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC12□□□□□ -0.49
Tnfrsf1aP25118 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC12□□□□□ -0.49
Tnfrsf1aP25118 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC12□□□□□ -0.49
Tnfrsf1aP25118 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Tnfrsf1aP25118 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC12□□□□□ -0.49
Tnfrsf1aP25118 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC12□□□□□ -0.49
Tnfrsf1aP25118 Mir8117-201ENSMUST00000184773 107 ntBASIC12□□□□□ -0.49
Tnfrsf1aP25118 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC12□□□□□ -0.49
Tnfrsf1aP25118 Gm45747-201ENSMUST00000212203 999 ntBASIC12□□□□□ -0.49
Tnfrsf1aP25118 AC159295.1-201ENSMUST00000225326 940 ntBASIC12□□□□□ -0.49
Tnfrsf1aP25118 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tnfrsf1aP25118 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tnfrsf1aP25118 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tnfrsf1aP25118 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tnfrsf1aP25118 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tnfrsf1aP25118 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tnfrsf1aP25118 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC12□□□□□ -0.49
Tnfrsf1aP25118 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tnfrsf1aP25118 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tnfrsf1aP25118 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Tnfrsf1aP25118 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Tnfrsf1aP25118 Gm4081-201ENSMUST00000195287 1838 ntBASIC12□□□□□ -0.49
Tnfrsf1aP25118 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tnfrsf1aP25118 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Tnfrsf1aP25118 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12□□□□□ -0.49
Tnfrsf1aP25118 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfrsf1aP25118 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
Tnfrsf1aP25118 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfrsf1aP25118 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfrsf1aP25118 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC11.99□□□□□ -0.49
Tnfrsf1aP25118 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfrsf1aP25118 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfrsf1aP25118 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfrsf1aP25118 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfrsf1aP25118 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfrsf1aP25118 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfrsf1aP25118 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC11.99□□□□□ -0.49
Tnfrsf1aP25118 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC11.99□□□□□ -0.49
Tnfrsf1aP25118 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfrsf1aP25118 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfrsf1aP25118 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfrsf1aP25118 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC11.99□□□□□ -0.49
Tnfrsf1aP25118 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Tnfrsf1aP25118 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC11.99□□□□□ -0.49
Tnfrsf1aP25118 Gm17968-201ENSMUST00000194902 784 ntBASIC11.99□□□□□ -0.49
Tnfrsf1aP25118 Gm44492-201ENSMUST00000197012 141 ntBASIC11.99□□□□□ -0.49
Tnfrsf1aP25118 Gm5712-201ENSMUST00000199748 1043 ntBASIC11.99□□□□□ -0.49
Tnfrsf1aP25118 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC11.99□□□□□ -0.49
Tnfrsf1aP25118 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfrsf1aP25118 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfrsf1aP25118 CT025555.1-201ENSMUST00000225901 1217 ntBASIC11.99□□□□□ -0.49
Tnfrsf1aP25118 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfrsf1aP25118 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC11.99□□□□□ -0.49
Tnfrsf1aP25118 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfrsf1aP25118 AC131586.3-201ENSMUST00000228355 1367 ntBASIC11.99□□□□□ -0.49
Tnfrsf1aP25118 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfrsf1aP25118 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfrsf1aP25118 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfrsf1aP25118 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC11.99□□□□□ -0.49
Tnfrsf1aP25118 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Tnfrsf1aP25118 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfrsf1aP25118 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfrsf1aP25118 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfrsf1aP25118 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfrsf1aP25118 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfrsf1aP25118 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Tnfrsf1aP25118 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfrsf1aP25118 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Tnfrsf1aP25118 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tnfrsf1aP25118 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Tnfrsf1aP25118 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
Tnfrsf1aP25118 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC11.98□□□□□ -0.49
Tnfrsf1aP25118 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tnfrsf1aP25118 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tnfrsf1aP25118 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tnfrsf1aP25118 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tnfrsf1aP25118 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Tnfrsf1aP25118 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Tnfrsf1aP25118 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tnfrsf1aP25118 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Tnfrsf1aP25118 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC11.98□□□□□ -0.49
Tnfrsf1aP25118 Gm44945-201ENSMUST00000206764 1187 ntBASIC11.98□□□□□ -0.49
Tnfrsf1aP25118 AC090659.1-201ENSMUST00000224334 768 ntBASIC11.98□□□□□ -0.49
Tnfrsf1aP25118 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Tnfrsf1aP25118 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tnfrsf1aP25118 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tnfrsf1aP25118 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Tnfrsf1aP25118 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Tnfrsf1aP25118 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tnfrsf1aP25118 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms