Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hoxc9P09633 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hoxc9P09633 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC18.42■□□□□ 0.54
Hoxc9P09633 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hoxc9P09633 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Hoxc9P09633 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC18.42■□□□□ 0.54
Hoxc9P09633 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hoxc9P09633 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC18.42■□□□□ 0.54
Hoxc9P09633 AC121801.1-201ENSMUST00000225363 1899 ntBASIC18.42■□□□□ 0.54
Hoxc9P09633 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Hoxc9P09633 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hoxc9P09633 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hoxc9P09633 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hoxc9P09633 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hoxc9P09633 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hoxc9P09633 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hoxc9P09633 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hoxc9P09633 Gm12928-201ENSMUST00000117115 573 ntBASIC18.42■□□□□ 0.54
Hoxc9P09633 Gm12416-201ENSMUST00000120911 1008 ntBASIC18.42■□□□□ 0.54
Hoxc9P09633 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC18.42■□□□□ 0.54
Hoxc9P09633 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC18.42■□□□□ 0.54
Hoxc9P09633 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Hoxc9P09633 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC18.42■□□□□ 0.54
Hoxc9P09633 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hoxc9P09633 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC18.42■□□□□ 0.54
Hoxc9P09633 Gm6159-201ENSMUST00000191249 1724 ntBASIC18.42■□□□□ 0.54
Hoxc9P09633 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hoxc9P09633 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Hoxc9P09633 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hoxc9P09633 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Hoxc9P09633 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hoxc9P09633 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Hoxc9P09633 Gm21038-201ENSMUST00000222205 1383 ntBASIC18.42■□□□□ 0.54
Hoxc9P09633 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hoxc9P09633 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hoxc9P09633 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hoxc9P09633 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Hoxc9P09633 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hoxc9P09633 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Hoxc9P09633 Gm37015-201ENSMUST00000192763 1521 ntBASIC18.41■□□□□ 0.54
Hoxc9P09633 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hoxc9P09633 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC18.41■□□□□ 0.54
Hoxc9P09633 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC18.41■□□□□ 0.54
Hoxc9P09633 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Hoxc9P09633 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hoxc9P09633 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC18.41■□□□□ 0.54
Hoxc9P09633 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hoxc9P09633 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Hoxc9P09633 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hoxc9P09633 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hoxc9P09633 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hoxc9P09633 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hoxc9P09633 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hoxc9P09633 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Hoxc9P09633 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hoxc9P09633 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC18.4■□□□□ 0.54
Hoxc9P09633 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hoxc9P09633 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hoxc9P09633 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hoxc9P09633 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hoxc9P09633 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hoxc9P09633 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hoxc9P09633 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hoxc9P09633 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hoxc9P09633 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Hoxc9P09633 Gm13226-201ENSMUST00000117838 404 ntBASIC18.4■□□□□ 0.54
Hoxc9P09633 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC18.4■□□□□ 0.54
Hoxc9P09633 Gm8652-201ENSMUST00000181363 964 ntBASIC18.4■□□□□ 0.54
Hoxc9P09633 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Hoxc9P09633 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Hoxc9P09633 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Hoxc9P09633 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hoxc9P09633 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hoxc9P09633 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hoxc9P09633 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hoxc9P09633 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC18.4■□□□□ 0.54
Hoxc9P09633 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
Hoxc9P09633 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Hoxc9P09633 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
Hoxc9P09633 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Hoxc9P09633 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hoxc9P09633 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Hoxc9P09633 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Hoxc9P09633 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hoxc9P09633 Mup-ps23-201ENSMUST00000118063 630 ntBASIC18.39■□□□□ 0.53
Hoxc9P09633 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC18.39■□□□□ 0.53
Hoxc9P09633 Gm27486-201ENSMUST00000184923 80 ntBASIC18.39■□□□□ 0.53
Hoxc9P09633 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hoxc9P09633 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC18.39■□□□□ 0.53
Hoxc9P09633 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC18.39■□□□□ 0.53
Hoxc9P09633 Gm7561-201ENSMUST00000211203 886 ntBASIC18.39■□□□□ 0.53
Hoxc9P09633 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hoxc9P09633 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hoxc9P09633 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hoxc9P09633 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Hoxc9P09633 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Hoxc9P09633 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Hoxc9P09633 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Hoxc9P09633 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Hoxc9P09633 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms