Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
P01852 Gm7336-201ENSMUST00000107041 1232 ntBASIC13.1□□□□□ -0.31
P01852 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
P01852 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC13.1□□□□□ -0.31
P01852 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
P01852 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
P01852 Gm44872-201ENSMUST00000207864 420 ntBASIC13.1□□□□□ -0.31
P01852 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
P01852 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
P01852 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
P01852 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
P01852 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
P01852 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
P01852 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
P01852 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
P01852 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC13.1□□□□□ -0.31
P01852 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
P01852 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
P01852 AC162938.1-201ENSMUST00000213140 2323 ntBASIC13.1□□□□□ -0.31
P01852 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
P01852 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
P01852 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
P01852 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
P01852 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
P01852 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
P01852 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC13.09□□□□□ -0.31
P01852 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
P01852 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC13.09□□□□□ -0.31
P01852 Gm9856-201ENSMUST00000217077 2578 ntBASIC13.09□□□□□ -0.31
P01852 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
P01852 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
P01852 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
P01852 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
P01852 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
P01852 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
P01852 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
P01852 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
P01852 Gm22175-201ENSMUST00000175007 78 ntBASIC13.09□□□□□ -0.31
P01852 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
P01852 AC139382.1-201ENSMUST00000221402 498 ntBASIC13.09□□□□□ -0.31
P01852 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
P01852 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
P01852 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
P01852 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
P01852 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
P01852 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
P01852 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC13.09□□□□□ -0.31
P01852 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
P01852 Gm13517-201ENSMUST00000120782 1495 ntBASIC13.09□□□□□ -0.31
P01852 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
P01852 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
P01852 Gm37691-201ENSMUST00000192147 2573 ntBASIC13.09□□□□□ -0.31
P01852 CT030684.3-201ENSMUST00000227308 2445 ntBASIC13.09□□□□□ -0.31
P01852 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
P01852 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
P01852 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
P01852 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
P01852 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.31
P01852 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
P01852 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
P01852 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
P01852 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC13.08□□□□□ -0.31
P01852 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
P01852 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
P01852 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
P01852 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
P01852 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
P01852 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
P01852 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
P01852 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
P01852 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
P01852 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC13.08□□□□□ -0.32
P01852 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC13.08□□□□□ -0.32
P01852 Mir6956-201ENSMUST00000183598 62 ntBASIC13.08□□□□□ -0.32
P01852 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
P01852 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
P01852 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
P01852 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
P01852 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
P01852 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
P01852 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
P01852 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
P01852 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
P01852 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
P01852 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
P01852 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
P01852 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
P01852 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
P01852 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
P01852 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC13.08□□□□□ -0.32
P01852 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
P01852 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC13.08□□□□□ -0.32
P01852 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
P01852 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
P01852 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
P01852 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
P01852 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
P01852 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
P01852 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
P01852 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms