Protein–RNA interactions for Protein: P01572

Ifna1, Interferon alpha-1, mousemouse

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ifna1P01572 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Ifna1P01572 Gm37411-201ENSMUST00000194180 2282 ntBASIC12.08□□□□□ -0.48
Ifna1P01572 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ifna1P01572 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Ifna1P01572 AC119177.1-201ENSMUST00000227647 1332 ntBASIC12.08□□□□□ -0.48
Ifna1P01572 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ifna1P01572 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ifna1P01572 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ifna1P01572 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC12.07□□□□□ -0.48
Ifna1P01572 Tcf21-202ENSMUST00000218002 1788 ntBASIC12.07□□□□□ -0.48
Ifna1P01572 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ifna1P01572 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ifna1P01572 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ifna1P01572 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ifna1P01572 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC12.07□□□□□ -0.48
Ifna1P01572 Gm42872-201ENSMUST00000200026 1967 ntBASIC12.07□□□□□ -0.48
Ifna1P01572 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ifna1P01572 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Ifna1P01572 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC12.07□□□□□ -0.48
Ifna1P01572 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Ifna1P01572 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC12.07□□□□□ -0.48
Ifna1P01572 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ifna1P01572 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC12.07□□□□□ -0.48
Ifna1P01572 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ifna1P01572 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC12.07□□□□□ -0.48
Ifna1P01572 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ifna1P01572 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ifna1P01572 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Ifna1P01572 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC12.07□□□□□ -0.48
Ifna1P01572 Gm4691-201ENSMUST00000182339 1000 ntBASIC12.07□□□□□ -0.48
Ifna1P01572 Gm6944-201ENSMUST00000182449 1006 ntBASIC12.07□□□□□ -0.48
Ifna1P01572 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC12.07□□□□□ -0.48
Ifna1P01572 Gm2451-201ENSMUST00000199447 999 ntBASIC12.07□□□□□ -0.48
Ifna1P01572 Gm10290-201ENSMUST00000200451 999 ntBASIC12.07□□□□□ -0.48
Ifna1P01572 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC12.07□□□□□ -0.48
Ifna1P01572 Olfr286-202ENSMUST00000205305 969 ntBASIC12.07□□□□□ -0.48
Ifna1P01572 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ifna1P01572 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ifna1P01572 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ifna1P01572 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ifna1P01572 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ifna1P01572 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC12.07□□□□□ -0.48
Ifna1P01572 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ifna1P01572 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ifna1P01572 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ifna1P01572 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ifna1P01572 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ifna1P01572 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ifna1P01572 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ifna1P01572 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ifna1P01572 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ifna1P01572 Gm30238-201ENSMUST00000195528 2603 ntBASIC12.07□□□□□ -0.48
Ifna1P01572 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Ifna1P01572 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ifna1P01572 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ifna1P01572 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ifna1P01572 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ifna1P01572 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC12.06□□□□□ -0.48
Ifna1P01572 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ifna1P01572 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ifna1P01572 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ifna1P01572 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ifna1P01572 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ifna1P01572 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ifna1P01572 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC12.06□□□□□ -0.48
Ifna1P01572 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Ifna1P01572 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ifna1P01572 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ifna1P01572 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
Ifna1P01572 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC12.06□□□□□ -0.48
Ifna1P01572 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ifna1P01572 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ifna1P01572 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ifna1P01572 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC12.06□□□□□ -0.48
Ifna1P01572 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ifna1P01572 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC12.06□□□□□ -0.48
Ifna1P01572 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ifna1P01572 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC12.06□□□□□ -0.48
Ifna1P01572 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ifna1P01572 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ifna1P01572 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ifna1P01572 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ifna1P01572 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ifna1P01572 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
Ifna1P01572 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ifna1P01572 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ifna1P01572 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ifna1P01572 Gm5366-201ENSMUST00000215494 1338 ntBASIC12.06□□□□□ -0.48
Ifna1P01572 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ifna1P01572 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ifna1P01572 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ifna1P01572 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ifna1P01572 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ifna1P01572 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ifna1P01572 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Ifna1P01572 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ifna1P01572 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC12.06□□□□□ -0.48
Ifna1P01572 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ifna1P01572 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ifna1P01572 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms