Protein–RNA interactions for Protein: O70258

Sgce, Epsilon-sarcoglycan, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgceO70258 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SgceO70258 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
SgceO70258 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
SgceO70258 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
SgceO70258 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SgceO70258 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SgceO70258 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
SgceO70258 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC12.82□□□□□ -0.36
SgceO70258 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC12.82□□□□□ -0.36
SgceO70258 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC12.82□□□□□ -0.36
SgceO70258 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SgceO70258 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SgceO70258 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SgceO70258 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
SgceO70258 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC12.82□□□□□ -0.36
SgceO70258 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SgceO70258 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
SgceO70258 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
SgceO70258 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
SgceO70258 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SgceO70258 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
SgceO70258 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC12.82□□□□□ -0.36
SgceO70258 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SgceO70258 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
SgceO70258 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
SgceO70258 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
SgceO70258 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
SgceO70258 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
SgceO70258 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC12.82□□□□□ -0.36
SgceO70258 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SgceO70258 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SgceO70258 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SgceO70258 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC12.81□□□□□ -0.36
SgceO70258 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
SgceO70258 Gm37691-201ENSMUST00000192147 2573 ntBASIC12.81□□□□□ -0.36
SgceO70258 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SgceO70258 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SgceO70258 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
SgceO70258 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC12.81□□□□□ -0.36
SgceO70258 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
SgceO70258 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SgceO70258 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
SgceO70258 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SgceO70258 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
SgceO70258 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SgceO70258 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SgceO70258 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC12.81□□□□□ -0.36
SgceO70258 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
SgceO70258 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
SgceO70258 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SgceO70258 Gm11025-201ENSMUST00000140773 466 ntBASIC12.81□□□□□ -0.36
SgceO70258 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
SgceO70258 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC12.81□□□□□ -0.36
SgceO70258 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SgceO70258 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC12.81□□□□□ -0.36
SgceO70258 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
SgceO70258 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC12.81□□□□□ -0.36
SgceO70258 CT030684.1-201ENSMUST00000227292 914 ntBASIC12.81□□□□□ -0.36
SgceO70258 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SgceO70258 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SgceO70258 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SgceO70258 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
SgceO70258 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
SgceO70258 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
SgceO70258 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SgceO70258 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
SgceO70258 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
SgceO70258 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
SgceO70258 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SgceO70258 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
SgceO70258 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
SgceO70258 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
SgceO70258 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
SgceO70258 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SgceO70258 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
SgceO70258 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SgceO70258 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
SgceO70258 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
SgceO70258 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SgceO70258 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SgceO70258 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SgceO70258 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SgceO70258 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SgceO70258 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SgceO70258 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC12.8□□□□□ -0.36
SgceO70258 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SgceO70258 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SgceO70258 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
SgceO70258 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SgceO70258 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SgceO70258 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
SgceO70258 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SgceO70258 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
SgceO70258 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
SgceO70258 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SgceO70258 Gm14451-201ENSMUST00000121581 1542 ntBASIC12.8□□□□□ -0.36
SgceO70258 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SgceO70258 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SgceO70258 Gm6973-201ENSMUST00000117080 721 ntBASIC12.8□□□□□ -0.36
SgceO70258 Gm11543-201ENSMUST00000120758 370 ntBASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms